RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DCTDP32321 178 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 CAPZA2P47755 286 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 METTL11BQ5VVY1 283 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 MEIOBQ8N635 442 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 OR4N2Q8NGD1 307 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 C1orf216Q8TAB5 229 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 RBPMSQ93062 196 aaKnown RBP16.03■□□□□ 0.16
SCARF1-205ENST00000571272 TSPAN10Q9H1Z9 355 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-205ENST00000571272 CHD9Q3L8U1 2897 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 GABARAPH6UMI1 98 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 SMIM10L1P0DMW3 83 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 CXCL2P19875 107 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 GJA4P35212 333 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 STX4Q12846 297 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 LINC00303Q3SY05 128 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 SEZ6L2Q6UXD5 910 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 SYNPRQ8TBG9 265 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 FCAMRQ8WWV6 532 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 SMIM10Q96HG1 83 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 RSPH9Q9H1X1 276 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-205ENST00000571272 NPDC1Q9NQX5 325 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-205ENST00000571272 PIPOXQ9P0Z9 390 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 KLF15Q9UIH9 416 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 SERTAD3Q9UJW9 196 aa16.03■□□□□ 0.16
SCARF1-205ENST00000571272 ZNF346Q9UL40 294 aaKnown RBP16.03■□□□□ 0.16
SCARF1-205ENST00000571272 RPP14O95059 124 aaKnown RBP16.02■□□□□ 0.16
SCARF1-205ENST00000571272 DPP4P27487 766 aa16.02■□□□□ 0.16
SCARF1-205ENST00000571272 NANOS3P60323 173 aaKnown RBP16.02■□□□□ 0.16
SCARF1-205ENST00000571272 RPS21P63220 83 aaKnown RBP16.02■□□□□ 0.16
SCARF1-205ENST00000571272 FGF13Q92913 245 aa16.02■□□□□ 0.16
SCARF1-205ENST00000571272 TRPV4Q9HBA0 871 aa16.02■□□□□ 0.16
SCARF1-205ENST00000571272 NANSQ9NR45 359 aa16.02■□□□□ 0.16
SCARF1-205ENST00000571272 ICAM5Q9UMF0 924 aa16.02■□□□□ 0.16
SCARF1-205ENST00000571272 AIPO00170 330 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 NDUFB2O95178 105 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 PVRP15151 417 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 POU3F2P20265 443 aaPredicted RBP16.02■□□□□ 0.15
SCARF1-205ENST00000571272 ACAA2P42765 397 aaKnown RBP16.02■□□□□ 0.15
SCARF1-205ENST00000571272 PRMT2P55345 433 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 PRICKLE4Q2TBC4 344 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 TMEM69Q5SWH9 247 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 RTL10Q7L3V2 364 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 MOSPD2Q8NHP6 518 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 TM4SF19Q96DZ7 209 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 STACQ99469 402 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 C14orf105Q9NVL8 296 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 CA5BQ9Y2D0 317 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 PCDHGA5Q9Y5G8 931 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 FKBP7Q9Y680 259 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 F5P12259 2224 aa16.02■□□□□ 0.15
SCARF1-205ENST00000571272 A0A1B0GUH1 482 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 C4orf47A7E2U8 309 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 H3BSH0 61 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 ZFPL1O95159 310 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 ACSM4P0C7M7 580 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PTGS2P35354 604 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PTH2RP49190 550 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PSMA6P60900 246 aaKnown RBP16.01■□□□□ 0.15
SCARF1-205ENST00000571272 NDUFAF6Q330K2 333 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 OR5M10Q6IEU7 315 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 NHLRC1Q6VVB1 395 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 DGAT2L6Q6ZPD8 337 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 POMGNT2Q8NAT1 580 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 RASD2Q96D21 266 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TAS2R10Q9NYW0 307 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 AKAP7Q9P0M2 348 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-205ENST00000571272 OR6C68A6NDL8 312 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 POM121BA6NF01 834 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 POM121CA8CG34 1229 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PRR32B1ATL7 298 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 L7N2F9 121 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TSPAN4O14817 238 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PRAF2O60831 178 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 ECDO95905 644 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TYRP1P17643 537 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 C5AR1P21730 350 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 SEC13P55735 322 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 OC90Q02509 493 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-205ENST00000571272 HTR4Q13639 388 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 FAM53BQ14153 422 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PRRT3Q5FWE3 981 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 SFRP5Q5T4F7 317 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 UNQ9370/PRO34162Q6UXP9 181 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 C3P1Q6ZMU1 363 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 UXS1Q8NBZ7 420 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 OR52B4Q8NGK2 314 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 OR14A16Q8NHC5 309 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 ZNF426Q9BUY5 554 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 SEMA4CQ9C0C4 833 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 HEBP2Q9Y5Z4 205 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 V9GY05 133 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 ARHGEF17Q96PE2 2063 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 PRSS38A1L453 326 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 GPR75O95800 540 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
SCARF1-205ENST00000571272 ATF4P18848 351 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-205ENST00000571272 SOX2P48431 317 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms