RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 OR4A8P0C604 315 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 UQCRBP14927 111 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 UQCRC2P22695 453 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 GIFP27352 417 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 KHKP50053 298 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 UBE2NP61088 152 aaKnown RBP16.52■□□□□ 0.24
SCARF1-204ENST00000570902 C3orf36Q3SXR2 165 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 UGT2A3Q6UWM9 527 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 LINC01356Q8N9X3 169 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 OR8J2Q8NGG1 315 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 RAB8BQ92930 207 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 ZG16BQ96DA0 208 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 AURKBQ96GD4 344 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-204ENST00000570902 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-204ENST00000570902 SOX7Q9BT81 388 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 SSU72Q9NP77 194 aaKnown RBP16.52■□□□□ 0.24
SCARF1-204ENST00000570902 ASIC5Q9NY37 505 aa16.52■□□□□ 0.24
SCARF1-204ENST00000570902 LRP5LA4QPB2 252 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 VSTM5A8MXK1 200 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 ZNF587BE7ETH6 402 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 FAAHO00519 579 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 GPIP06744 558 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 TACSTD2P09758 323 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 MYZAPP0CAP1 466 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 TACR3P29371 465 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 SLC1A3P43003 542 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 EMX2Q04743 252 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 FUT5Q11128 374 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 CHI3L2Q15782 390 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 ZSWIM7Q19AV6 140 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 TBRG1Q3YBR2 411 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 GPAT3Q53EU6 434 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 C12orf54Q6X4T0 127 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 ZIC4Q8N9L1 334 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 VPS37AQ8NEZ2 397 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 OR4F15Q8NGB8 312 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 OR1K1Q8NGR3 316 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 NEU4Q8WWR8 484 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-204ENST00000570902 CNOT9Q92600 299 aaKnown RBP16.51■□□□□ 0.23
SCARF1-204ENST00000570902 ZNF385AQ96PM9 386 aaKnown RBP16.51■□□□□ 0.23
SCARF1-204ENST00000570902 PCDHB14Q9Y5E9 798 aa16.51■□□□□ 0.23
SCARF1-204ENST00000570902 ARPC4-TTLL3A0A0A6YYG9 625 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 OR6C65A6NJZ3 312 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 CLDN24A6NM45 220 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 AP3D1O14617 1153 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 TM9SF1O15321 606 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 ITM2AO43736 263 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 DAOP14920 347 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 ITGA2P17301 1181 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 PCMT1P22061 227 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 APEX1P27695 318 aaKnown RBP16.5■□□□□ 0.23
SCARF1-204ENST00000570902 NAAAQ02083 359 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 PLAURQ03405 335 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 MPP2Q14168 576 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 GNA13Q14344 377 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 ANXA8L1Q5VT79 327 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 SAXO2Q658L1 398 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 VHLLQ6RSH7 139 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 HMGN2P46Q86SG4 172 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 GPAT4Q86UL3 456 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 C1orf159Q96HA4 380 aa16.5■□□□□ 0.23
SCARF1-204ENST00000570902 PAIP2Q9BPZ3 127 aaKnown RBP16.5■□□□□ 0.23
SCARF1-204ENST00000570902 CRNNQ9UBG3 495 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-204ENST00000570902 PRSS51A0A1B0GVH4 220 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 ZC3H12DA2A288 527 aaKnown RBP16.49■□□□□ 0.23
SCARF1-204ENST00000570902 AQP7P3A6NL99 342 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 BIRC5O15392 142 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 AKR7A3O95154 331 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 SERPINE1P05121 402 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 CHI3L1P36222 383 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-204ENST00000570902 CEACAM7Q14002 265 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 OR7A5Q15622 319 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 TMEM225Q6GV28 225 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 ANKRD16Q6P6B7 361 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 TMEM99Q8N816 258 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 NUP37Q8NFH4 326 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 MAGEE2Q8TD90 523 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-204ENST00000570902 NEURL3Q96EH8 262 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 ZNF442Q9H7R0 627 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 MARCOQ9UEW3 520 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-204ENST00000570902 PRDM4Q9UKN5 801 aa16.49■□□□□ 0.23
SCARF1-204ENST00000570902 CFAP73A6NFT4 308 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 AGAP5A6NIR3 686 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 LIPT2A6NK58 231 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 LILRA1O75019 489 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 CPSF4O95639 269 aaKnown RBP16.48■□□□□ 0.23
SCARF1-204ENST00000570902 LGI1O95970 557 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 CECR9P0C854 216 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 HOXB1P14653 301 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-204ENST00000570902 ABCE1P61221 599 aaKnown RBP16.48■□□□□ 0.23
SCARF1-204ENST00000570902 GSTA3Q16772 222 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 ANKRD46Q86W74 232 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 ZNF786Q8N393 782 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 FAM169BQ8N8A8 192 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 ANKRD42Q8N9B4 389 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 ANKRD27Q96NW4 1050 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 TRNT1Q96Q11 434 aaKnown RBP16.48■□□□□ 0.23
SCARF1-204ENST00000570902 SNX18Q96RF0 628 aa16.48■□□□□ 0.23
SCARF1-204ENST00000570902 DPY30Q9C005 99 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms