RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.26□□□□□ -1.89
SMG6-208ENST00000570874 ISCA2Q86U28 154 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 SERPINA9Q86WD7 417 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 TMEM17Q86X19 198 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 WFDC3Q8IUB2 231 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZNF595Q8IYB9 648 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 CPNE9Q8IYJ1 553 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZFP82Q8N141 532 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 Q8N1Y9 231 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 METTL4Q8N3J2 472 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 LNX2Q8N448 690 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZNF561Q8N587 486 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 AMER2Q8N7J2 671 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 BEND7Q8N7W2 519 aaPredicted RBP3.26□□□□□ -1.89
SMG6-208ENST00000570874 CCDC71LQ8N9Z2 235 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 PSD4Q8NDX1 1056 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 STXBP6Q8NFX7 210 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 OR10A7Q8NGE5 316 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 OR5T2Q8NGG2 359 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 OR9G4Q8NGQ1 327 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 OR4A16Q8NH70 328 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 FAM45AQ8TCE6 357 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 CD200R1Q8TD46 325 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 MRGPRDQ8TDS7 321 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 GIPC3Q8TF64 312 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 FAM222BQ8WU58 562 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZNF480Q8WV37 535 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 TMEM239Q8WW34 195 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ACOT11Q8WXI4 607 aaPredicted RBP3.26□□□□□ -1.89
SMG6-208ENST00000570874 ST8SIA1Q92185 356 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 FGF14Q92915 247 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 HGDQ93099 445 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ACDQ96AP0 544 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 FAM131CQ96AQ9 280 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 DGCR14Q96DF8 476 aaKnown RBP3.26□□□□□ -1.89
SMG6-208ENST00000570874 CMTM5Q96DZ9 223 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 SGTBQ96EQ0 304 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 AJUBAQ96IF1 538 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 FAR2Q96K12 515 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 MARK4Q96L34 752 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 C10orf90Q96M02 699 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZNF285Q96NJ3 590 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 MUS81Q96NY9 551 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 BIRC8Q96P09 236 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ATOH8Q96SQ7 321 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 SERPINI1Q99574 410 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 KLHDC3Q9BQ90 382 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 TMEM79Q9BSE2 394 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 NICN1Q9BSH3 213 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 POLDIP3Q9BY77 421 aaKnown RBP3.26□□□□□ -1.89
SMG6-208ENST00000570874 TPSD1Q9BZJ3 242 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 NMUR2Q9GZQ4 415 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 KCNK15Q9H427 330 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZCCHC4Q9H5U6 513 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ALG9Q9H6U8 611 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 CARS2Q9HA77 564 aaKnown RBP3.26□□□□□ -1.89
SMG6-208ENST00000570874 UBTD1Q9HAC8 227 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 SLC28A3Q9HAS3 691 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 SPHK1Q9NYA1 384 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 PIPOXQ9P0Z9 390 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ARMCX1Q9P291 453 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 COPS7AQ9UBW8 275 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZDHHC2Q9UIJ5 367 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ACSL5Q9ULC5 683 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 FIS1Q9Y3D6 152 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 ZNF337Q9Y3M9 751 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 MMACHCQ9Y4U1 282 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 PPIAL4AQ9Y536 164 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 PTGDR2Q9Y5Y4 395 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 AUP1Q9Y679 476 aa3.26□□□□□ -1.89
SMG6-208ENST00000570874 F5P12259 2224 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 EML6Q6ZMW3 1958 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 EYSQ5T1H1 3165 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TRANK1O15050 2925 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FER1L5A0AVI2 2057 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LOC105371242A0A075B767 164 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TRBV5-4A0A0C4DH59 114 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 GLYATL1P3A0A0U1RQE8 302 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 A0A1B0GVG6 124 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TMEM82A0PJX8 343 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TMEM89A2RUT3 159 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SAGE2PA6NJ88 616 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 C9orf172C9J069 976 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 H0YIG0 161 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LINC01387J3KSC0 135 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 K7ESM1 405 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 M0R036 132 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 UBFD1O14562 309 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 SLC22A1O15245 554 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CFLARO15519 480 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TPST2O60704 377 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SLC43A1O75387 559 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 RGS9O75916 674 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 AP2A2O94973 939 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ALX3O95076 343 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 BRI3O95415 125 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CST1P01037 141 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 C9P02748 559 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SERPINE2P07093 398 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms