RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 WDR60Q8WVS4 1066 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 TMEM45BQ96B21 275 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 ZBTB9Q96C00 473 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 DPY30Q9C005 99 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 SAP130Q9H0E3 1048 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 SLC38A1Q9H2H9 487 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 NELFAQ9H3P2 528 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 TPK1Q9H3S4 243 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 NARFLQ9H6Q4 476 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 AKTIPQ9H8T0 292 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 EXOSC3Q9NQT5 275 aaKnown RBP10.48□□□□□ -0.73
CAPN3-220ENST00000569827 PARPBPQ9NWS1 579 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 MKS1Q9NXB0 559 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 PCDHGB4Q9UN71 923 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 TRAPPC4Q9Y296 219 aa10.48□□□□□ -0.73
CAPN3-220ENST00000569827 ZNF503-AS2A6NEH8 195 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 LIPT2A6NK58 231 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 hCG_2039718K7EN88 272 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 EIF1BO60739 113 aaKnown RBP10.47□□□□□ -0.73
CAPN3-220ENST00000569827 LILRA1O75019 489 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 STAMBPO95630 424 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 GSNP06396 782 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 PGRP06401 933 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 DAOP14920 347 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 APEX1P27695 318 aaKnown RBP10.47□□□□□ -0.73
CAPN3-220ENST00000569827 THBS2P35442 1172 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 THBS4P35443 961 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 CDKN2CP42773 168 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 CLK1P49759 484 aaKnown RBP10.47□□□□□ -0.73
CAPN3-220ENST00000569827 IDH3GP51553 393 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-220ENST00000569827 HGFACQ04756 655 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 RUNX1T1Q06455 604 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 EPS8Q12929 822 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 LIPNQ5VXI9 398 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 NIPAL3Q6P499 406 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 VRK2Q86Y07 508 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 CDK20Q8IZL9 346 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 OR8J2Q8NGG1 315 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 NEURL3Q96EH8 262 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 TEX37Q96LM6 180 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 PLA2G12AQ9BZM1 189 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 SEC14L4Q9UDX3 406 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 MGAM2Q2M2H8 2515 aa10.47□□□□□ -0.73
CAPN3-220ENST00000569827 AQP7P3A6NL99 342 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 B9A039 149 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 ZNF587BE7ETH6 402 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 ZNF208O43345 1280 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 FRS3O43559 492 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 TCF21O43680 179 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 CRYAAP02489 173 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 BPGMP07738 259 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 IGFBP1P08833 259 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-220ENST00000569827 PRG2P13727 222 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 SLC1A3P43003 542 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 HTR3AP46098 478 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 P2RY4P51582 365 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
CAPN3-220ENST00000569827 NPRL3Q12980 569 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 SQLEQ14534 574 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 CASP8Q14790 479 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 FAM174BQ3ZCQ3 159 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 ANKRD16Q6P6B7 361 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 ZNF836Q6ZNA1 936 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 SPATA21Q7Z572 469 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 CARM1Q86X55 608 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 POMGNT2Q8NAT1 580 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 BCL2L2Q92843 193 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-220ENST00000569827 C20orf27Q9GZN8 174 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 PLK3Q9H4B4 646 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 LPAR2Q9HBW0 351 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 POLE3Q9NRF9 147 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 TMEM45AQ9NWC5 275 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 ASIC5Q9NY37 505 aa10.46□□□□□ -0.73
CAPN3-220ENST00000569827 TMEFF2Q9UIK5 374 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-220ENST00000569827 PRSS51A0A1B0GVH4 220 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 CFAP73A6NFT4 308 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 AGAP5A6NIR3 686 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 VENTXO95231 258 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 AGR2O95994 175 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 GPIP06744 558 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 IL7RP16871 459 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 RPS4Y1P22090 263 aaKnown RBP10.45□□□□□ -0.74
CAPN3-220ENST00000569827 CXCR1P25024 350 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 CFPP27918 469 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 PPOXP50336 477 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 MAD2L1Q13257 205 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-220ENST00000569827 MAPK11Q15759 364 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 ADRM1Q16186 407 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 ZSWIM7Q19AV6 140 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 MSMPQ1L6U9 139 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 RPS26P11Q5JNZ5 115 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-220ENST00000569827 PRAMEF8Q5VWM4 474 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 PRAMEF7Q5VXH5 474 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 ATG16L1Q676U5 607 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 TMEM225Q6GV28 225 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 KRT80Q6KB66 452 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 CREB3L2Q70SY1 520 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 EPHX4Q8IUS5 362 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms