RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 C12orf66Q96MD2 445 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 TAAR1Q96RJ0 339 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 KCNK16Q96T55 309 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 NIPSNAP3BQ9BS92 247 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 GSDMCQ9BYG8 508 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CDC42EP4Q9H3Q1 356 aaKnown RBP1.58□□□□□ -2.16
UBR1-209ENST00000569243 RANBP3Q9H6Z4 567 aaPredicted RBP1.58□□□□□ -2.16
UBR1-209ENST00000569243 VCPKMTQ9H867 229 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 NPIPA1Q9UND3 350 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 RABL2BQ9UNT1 228 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CLCA3PQ9Y6N3 262 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 PIKFYVEQ9Y2I7 2098 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 GPRASP1Q5JY77 1395 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CABIN1Q9Y6J0 2220 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 ABCC9O60706 1549 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 TRIM64CA6NLI5 447 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 VSTM2BA6NLU5 285 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 G3V4G9 280 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 DCTN6O00399 190 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 SLC31A2O15432 143 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 OR4F21O95013 312 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 CTDNEP1O95476 244 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 COX5AP20674 150 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 CXCR2P25025 360 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ANXA13P27216 316 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 HTR2AP28223 471 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 CXCL5P42830 114 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ARRB1P49407 418 aaPredicted RBP1.57□□□□□ -2.16
UBR1-209ENST00000569243 EWSR1Q01844 656 aaKnown RBP eCLIP1.57□□□□□ -2.16
UBR1-209ENST00000569243 TNFRSF17Q02223 184 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ATP6AP1Q15904 470 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 PARP15Q460N3 678 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 CHRFAM7AQ494W8 412 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ATL3Q6DD88 541 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 GALNT17Q6IS24 598 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 TTC5Q8N0Z6 440 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 CLDN19Q8N6F1 224 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 OR5L2Q8NGL0 311 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 OR9G1Q8NH87 305 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 DTX3LQ8TDB6 740 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ACER1Q8TDN7 264 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 RAPGEF5Q92565 580 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 PAGE5Q96GU1 130 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 SEC22AQ96IW7 307 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 LINC00477Q96M19 166 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ZNF641Q96N77 438 aaPredicted RBP1.57□□□□□ -2.16
UBR1-209ENST00000569243 TMEM246Q9BRR3 403 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ZNF2Q9BSG1 426 aaPredicted RBP1.57□□□□□ -2.16
UBR1-209ENST00000569243 POLR1EQ9GZS1 481 aaKnown RBP1.57□□□□□ -2.16
UBR1-209ENST00000569243 WFDC1Q9HC57 220 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 MOSPD1Q9UJG1 213 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 MROH7-TTC4A0A0A0MT08 1334 aa1.57□□□□□ -2.16
UBR1-209ENST00000569243 ITGB4P16144 1822 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 COLCA2A8K830 154 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TRDCB7Z8K6 153 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 PEX7O00628 323 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 CHADO15335 359 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 RS1O15537 224 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 MBTPS2O43462 519 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 HMMRO75330 724 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 MT-ND3P03897 115 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 RHOXF2BP0C7M4 288 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 MUC1P15941 1255 aaPredicted RBP1.56□□□□□ -2.16
UBR1-209ENST00000569243 ZNF14P17017 642 aaPredicted RBP1.56□□□□□ -2.16
UBR1-209ENST00000569243 TNNI3P19429 210 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 ATP6V1B2P21281 511 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 CALCRP30988 508 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 SLC26A3P40879 764 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 POLR2FP61218 127 aaKnown RBP1.56□□□□□ -2.16
UBR1-209ENST00000569243 KIAA0087Q14695 138 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 GNMTQ14749 295 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TMEM183BQ1AE95 376 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TRIM16LQ309B1 348 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 Q6ZR03 302 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 PAQR7Q86WK9 346 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TMEM183AQ8IXX5 376 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 ZNF709Q8N972 641 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 FANK1Q8TC84 345 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TM4SF19Q96DZ7 209 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 GPA33Q99795 319 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 ALG12Q9BV10 488 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 CHMP4BQ9H444 224 aaKnown RBP1.56□□□□□ -2.16
UBR1-209ENST00000569243 ZNF430Q9H8G1 570 aaPredicted RBP1.56□□□□□ -2.16
UBR1-209ENST00000569243 WDR76Q9H967 626 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TM9SF3Q9HD45 589 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 GLRX2Q9NS18 164 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 AATFQ9NY61 560 aaKnown RBP eCLIP1.56□□□□□ -2.16
UBR1-209ENST00000569243 DEC1Q9P2X7 70 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 CLCF1Q9UBD9 225 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 OR12D3Q9UGF7 316 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 ODF2LQ9ULJ1 636 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 SLC25A15Q9Y619 301 aa1.56□□□□□ -2.16
UBR1-209ENST00000569243 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.55□□□□□ -2.16
UBR1-209ENST00000569243 TRAV40A0A0B4J280 105 aa1.55□□□□□ -2.16
UBR1-209ENST00000569243 A0A0G2JLM5 398 aa1.55□□□□□ -2.16
UBR1-209ENST00000569243 F8WDY8 70 aa1.55□□□□□ -2.16
UBR1-209ENST00000569243 MPHOSPH10O00566 681 aaKnown RBP1.55□□□□□ -2.16
UBR1-209ENST00000569243 B4GALT5O43286 388 aa1.55□□□□□ -2.16
UBR1-209ENST00000569243 LANCL1O43813 399 aa1.55□□□□□ -2.16
UBR1-209ENST00000569243 SUPT3HO75486 399 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms