RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GKN3PP0CG01 181 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 TCN1P20061 433 aaPredicted RBP12.86□□□□□ -0.35
USB1-214ENST00000568848 IDH3GP51553 393 aaPredicted RBP12.86□□□□□ -0.35
USB1-214ENST00000568848 CDH15P55291 814 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 SLC35A1P78382 337 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 KCNJ10P78508 379 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 SYPL1Q16563 259 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 GPAT3Q53EU6 434 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 ANKRD16Q6P6B7 361 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 RNF165Q6ZSG1 346 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 TCP10LQ8TDR4 215 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 ZNF837Q96EG3 531 aaPredicted RBP12.86□□□□□ -0.35
USB1-214ENST00000568848 ROPN1BQ9BZX4 212 aaPredicted RBP12.86□□□□□ -0.35
USB1-214ENST00000568848 ROPN1Q9HAT0 212 aaPredicted RBP12.86□□□□□ -0.35
USB1-214ENST00000568848 ATAD3AQ9NVI7 634 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 ADPRHL2Q9NX46 363 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 MKS1Q9NXB0 559 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 SEC14L4Q9UDX3 406 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 MID2Q9UJV3 735 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 SPIN1Q9Y657 262 aaPredicted RBP12.86□□□□□ -0.35
USB1-214ENST00000568848 B9A039 149 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 SCN2BO60939 215 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 WNT11O96014 354 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 CHRM4P08173 479 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 ADRA2AP08913 450 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 TACSTD2P09758 323 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 IFNGR1P15260 489 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 MAPK1P28482 360 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 P2RY4P51582 365 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 CHN2P52757 468 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 ACTG1P63261 375 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 ADRM1Q16186 407 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 NIPAL3Q6P499 406 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 PNPT1Q8TCS8 783 aaKnown RBP12.85□□□□□ -0.35
USB1-214ENST00000568848 BCL2L2Q92843 193 aaPredicted RBP12.85□□□□□ -0.35
USB1-214ENST00000568848 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 TUBGCP3Q96CW5 907 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 DOK1Q99704 481 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 KCNS3Q9BQ31 491 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 RLIMQ9NVW2 624 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 SLC35A3Q9Y2D2 325 aa12.85□□□□□ -0.35
USB1-214ENST00000568848 LIPT2A6NK58 231 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 ANKRD28O15084 1053 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 KRT33AO76009 404 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 CRYAAP02489 173 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 FGF4P08620 206 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 GIFP27352 417 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
USB1-214ENST00000568848 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
USB1-214ENST00000568848 NME5P56597 212 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 NPRL3Q12980 569 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 EFNB3Q15768 340 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
USB1-214ENST00000568848 KRT80Q6KB66 452 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 EPHX4Q8IUS5 362 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 TMEM45BQ96B21 275 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
USB1-214ENST00000568848 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 TRAPPC4Q9Y296 219 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
USB1-214ENST00000568848 OR6C65A6NJZ3 312 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 HMGN4O00479 90 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 DNPH1O43598 174 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 PRG2P13727 222 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 PRPS1L1P21108 318 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 PPOXP50336 477 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
USB1-214ENST00000568848 ARF1P84077 181 aaKnown RBP12.83□□□□□ -0.36
USB1-214ENST00000568848 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.36
USB1-214ENST00000568848 RIN1Q13671 783 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
USB1-214ENST00000568848 COX20Q5RI15 118 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 MRPL2Q5T653 305 aaKnown RBP12.83□□□□□ -0.36
USB1-214ENST00000568848 SAXO2Q658L1 398 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 PAQR6Q6TCH4 344 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 RNF130Q86XS8 419 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 CADM2Q8N3J6 435 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 MREGQ8N565 214 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 DDIT4LQ96D03 193 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 TMEM109Q9BVC6 243 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 SAP130Q9H0E3 1048 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 SLC38A1Q9H2H9 487 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 DYNLRB1Q9NP97 96 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.83□□□□□ -0.36
USB1-214ENST00000568848 EXD2Q9NVH0 621 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 TMEM45AQ9NWC5 275 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 PARPBPQ9NWS1 579 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 PCDHGB4Q9UN71 923 aa12.83□□□□□ -0.36
USB1-214ENST00000568848 IGHV2OR16-5A0A0B4J2B6 119 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms