RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 SHEQ5VZ18 495 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 NET1Q7Z628 596 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-211ENST00000568586 ZNF611Q8N823 705 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 OR9K2Q8NGE7 335 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 MFSD8Q8NHS3 518 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 CCL19Q99731 98 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 TAPBPLQ9BX59 468 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 TMEM120AQ9BXJ8 343 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 EVA1AQ9H8M9 152 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 SERPINB7O75635 380 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 VAMP5O95183 116 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 IGHV3-9P01782 118 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 FOSL1P15407 271 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 PAX1P15863 534 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 HTR2AP28223 471 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 NKX6-1P78426 367 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-211ENST00000568586 GLIPR1L2Q4G1C9 344 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 C11orf65Q8NCR3 313 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 WFDC11Q8NEX6 87 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 LILRB1Q8NHL6 650 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-211ENST00000568586 MUS81Q96NY9 551 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 PTDSS2Q9BVG9 487 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 TRIM2Q9C040 744 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 KAT8Q9H7Z6 458 aaKnown RBP25.9■■□□□ 1.74
RAB40C-211ENST00000568586 TAS2R16Q9NYV7 291 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 RNF115Q9Y4L5 304 aa25.9■■□□□ 1.74
RAB40C-211ENST00000568586 SMPD2O60906 423 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 MFN2O95140 757 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 PPA1Q15181 289 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 UBE2J2Q8N2K1 259 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 DNAJA4Q8WW22 397 aaPredicted RBP25.89■■□□□ 1.74
RAB40C-211ENST00000568586 MUCL1Q96DR8 90 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 AMBRA1Q9C0C7 1298 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 CCDC134Q9H6E4 229 aa25.89■■□□□ 1.74
RAB40C-211ENST00000568586 A0A1B0GWA3 101 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 DPRXA6NFQ7 191 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 TROVE2P10155 538 aaKnown RBP eCLIP25.88■■□□□ 1.73
RAB40C-211ENST00000568586 SELPLGQ14242 412 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 FAM91A1Q658Y4 838 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 CGB2Q6NT52 195 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 C5orf46Q6UWT4 87 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 PRSS57Q6UWY2 283 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 CASP12Q6UXS9 341 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 SLC7A10Q9NS82 523 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 TESQ9UGI8 421 aaKnown RBP25.88■■□□□ 1.73
RAB40C-211ENST00000568586 ANGPT4Q9Y264 503 aa25.88■■□□□ 1.73
RAB40C-211ENST00000568586 FBP2O00757 339 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ARHGEF9O43307 516 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 AHSA1O95433 338 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 CD3EP07766 207 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ITGA5P08648 1049 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 PNMTP11086 282 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 MTPNP58546 118 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 DMTNQ08495 405 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 FAPQ12884 760 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 NFYCQ13952 458 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 CAPRIN1Q14444 709 aaKnown RBP25.87■■□□□ 1.73
RAB40C-211ENST00000568586 GABRA6Q16445 453 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 COQ5Q5HYK3 327 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 C1QTNF12Q5T7M4 302 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 TSPO2Q5TGU0 170 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 OR7E24Q6IFN5 339 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ALKBH2Q6NS38 261 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ARMC8Q8IUR7 673 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 AKAP1Q92667 903 aaKnown RBP eCLIP25.87■■□□□ 1.73
RAB40C-211ENST00000568586 BOD1Q96IK1 185 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ZNF385AQ96PM9 386 aaKnown RBP25.87■■□□□ 1.73
RAB40C-211ENST00000568586 GSX2Q9BZM3 304 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 FGFR1OP2Q9NVK5 253 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ADPRHL2Q9NX46 363 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 RPS6KB2Q9UBS0 482 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 RASD1Q9Y272 281 aa25.87■■□□□ 1.73
RAB40C-211ENST00000568586 NIPBLQ6KC79 2804 aaeCLIP25.87■■□□□ 1.73
RAB40C-211ENST00000568586 ELOA3DA6NLF2 546 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-211ENST00000568586 TPST2O60704 377 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 AQP1P29972 269 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 GZMMP51124 257 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 FOXG1P55316 489 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-211ENST00000568586 BSPH1Q075Z2 132 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 STK11Q15831 433 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 ELOA3BQ3SY89 546 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 TMEM225Q6GV28 225 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 ULK3Q6PHR2 472 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 C1orf162Q8NEQ5 155 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-211ENST00000568586 ELOA3Q8NG57 546 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 OR52E4Q8NGH9 312 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 SLC38A4Q969I6 547 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 KTI12Q96EK9 354 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-211ENST00000568586 ZNF701Q9NV72 531 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-211ENST00000568586 NPAP1Q9NZP6 1156 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 SLC25A15Q9Y619 301 aa25.86■■□□□ 1.73
RAB40C-211ENST00000568586 IGKV1D-42A0A075B6H8 117 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 C8BP07358 591 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 ARFIP2P53365 341 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 RIPPLY3P57055 190 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 CYP51A1Q16850 503 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 CREB3L2Q70SY1 520 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 SLC30A8Q8IWU4 369 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 POMGNT2Q8NAT1 580 aa25.85■■□□□ 1.73
RAB40C-211ENST00000568586 WFDC6Q9BQY6 131 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms