RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 ENTHD1Q8IYW4 607 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 TVP23AA6NH52 213 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 TBXA2RP21731 343 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 GABARAPL2P60520 117 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 FAHD1Q6P587 224 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 LRFN4Q6PJG9 635 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 YIPF7Q8N8F6 280 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 NPRL2Q8WTW4 380 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 SPACA9Q96E40 222 aaPredicted RBP11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 PCDHGA10Q9Y5H3 936 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 LRRK1Q38SD2 2015 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 CENPVL1A0A0U1RR11 272 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 FTH1P19P0C7X4 201 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 C21orf33P30042 268 aaPredicted RBP11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 PYCR1P32322 319 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 SOX3P41225 446 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 SSPNQ14714 243 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 NCCRP1Q6ZVX7 275 aaPredicted RBP11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 GRINAQ7Z429 371 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 SHISA5Q8N114 240 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 ZNF721Q8TF20 911 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 RAB2BQ8WUD1 216 aa11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 AKIRIN1Q9H9L7 192 aaPredicted RBP11.11□□□□□ -0.63
TMEM170A-205ENST00000568559 ACOT7O00154 380 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 ZNF43P17038 809 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 IDUAP35475 653 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 CLRN1P58418 232 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 FOXC1Q12948 553 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 DMRTC1Q5HYR2 192 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 CBLN3Q6UW01 205 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 C9orf40Q8IXQ3 194 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 JAGN1Q8N5M9 183 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 KATNB1Q9BVA0 655 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 RPRD1BQ9NQG5 326 aaKnown RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 BOKQ9UMX3 212 aaPredicted RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 LRRN3E7EW58 273 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 AKAP8O43823 692 aaKnown RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 RCVRNP35243 200 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 DNASE1L1P49184 302 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 CEBPEQ15744 281 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 EEF1A1P5Q5VTE0 462 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 PRSS48Q7RTY5 328 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 MARCH9Q86YJ5 346 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 SNX29P2Q8IUI4 249 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 OR10G3Q8NGC4 313 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 OR2AJ1Q8NGZ0 328 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 GATAD2BQ8WXI9 593 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 ZMYND19Q96E35 227 aaPredicted RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 INIPQ9NRY2 104 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 DNAJB12Q9NXW2 375 aaKnown RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 TMEFF2Q9UIK5 374 aaPredicted RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 KLHL21Q9UJP4 597 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 EXOSC1Q9Y3B2 195 aaKnown RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 PRODHO43272 600 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 DDAH2O95865 285 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 GBX2P52951 348 aaPredicted RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 ISL1P61371 349 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 SCN1BQ07699 218 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 FUT5Q11128 374 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 ACBD7Q8N6N7 88 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 TMEM163Q8TC26 289 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 TTC9Q92623 222 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 IP6K3Q96PC2 410 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 NAA11Q9BSU3 229 aaPredicted RBP11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 UBQLN3Q9H347 655 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 TIGARQ9NQ88 270 aa11.1□□□□□ -0.63
TMEM170A-205ENST00000568559 PLXNB3Q9ULL4 1909 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 TRAV36DV7A0A075B6V5 113 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 A8MVM7 634 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 CD46P15529 392 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 EDNRAP25101 427 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 MSX1P28360 303 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 EEF1A1P68104 462 aaKnown RBP11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 ZNF615Q8N8J6 731 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 MED20Q9H944 212 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 WDR54Q9H977 334 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 LRFN1Q9P244 771 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 LAMP5Q9UJQ1 280 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 PCDHGB5Q9Y5G0 923 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 SCN8AQ9UQD0 1980 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 OR6C70A6NIJ9 312 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 ZNF670-ZNF695F2Z2N8 137 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 FFAR1O14842 300 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 SYNGR4O95473 234 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 IGHV3-9P01782 118 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 LCKP06239 509 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 CXCR4P61073 352 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 SPHARQ15513 63 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 MTFR2Q6P444 385 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 UEVLDQ8IX04 471 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 OR2T4Q8NH00 348 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 CTHRC1Q96CG8 243 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 MGLLQ99685 303 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 OR11A1Q9GZK7 315 aa11.09□□□□□ -0.63
TMEM170A-205ENST00000568559 FANCMQ8IYD8 2048 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms