RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 OIP5O43482 229 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 PRKNO60260 465 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 KLF7O75840 302 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 STK17BO94768 372 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 LCKP06239 509 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 FBXO45P0C2W1 286 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 JMJD7P0C870 316 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 APEHP13798 732 aaKnown RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 HK1P19367 917 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 FUT1P19526 365 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 MSX1P28360 303 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 DLX5P56178 289 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 FXYD6P3P58550 94 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 TGIF1Q15583 401 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 TMEM164Q5U3C3 297 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 CBLN3Q6UW01 205 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 C6orf15Q6UXA7 325 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 DPY19L2P2Q6ZN68 376 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 SLC16A12Q6ZSM3 486 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 CXXC5Q7LFL8 322 aaKnown RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 MARCH3Q86UD3 253 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 GALNT6Q8NCL4 622 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 OR52I1Q8NGK6 324 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 ST8SIA1Q92185 356 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 JAM3Q9BX67 310 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 ZBTB20Q9HC78 741 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-221ENST00000567935 MCCC2Q9HCC0 563 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 KLHL21Q9UJP4 597 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 B3GALT1Q9Y5Z6 326 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 SPENQ96T58 3664 aaKnown RBP13.28□□□□□ -0.28
COMMD4-221ENST00000567935 IGKV1D-42A0A075B6H8 117 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 TMEM200CA6NKL6 621 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 SLC22A31A6NKX4 558 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 VGLL3A8MV65 326 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 MYL12BO14950 172 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 ARPC3O15145 178 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 ATE1O95260 518 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 DLGAP3O95886 979 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 PTHP01270 115 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 UMODP07911 640 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 CD36P16671 472 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF3P17036 446 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 CXCR1P25024 350 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 TACR3P29371 465 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 POLR2HP52434 150 aaKnown RBP13.28□□□□□ -0.28
COMMD4-221ENST00000567935 MAP2K6P52564 334 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 RPS4XP62701 263 aaKnown RBP13.28□□□□□ -0.28
COMMD4-221ENST00000567935 SLC46A3Q7Z3Q1 461 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 GRINAQ7Z429 371 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 NANOGP1Q8N7R0 232 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 PSD4Q8NDX1 1056 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 OR51A7Q8NH64 312 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 RNFT2Q96EX2 444 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 IMMP1LQ96LU5 166 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 SECISBP2Q96T21 854 aaKnown RBP13.28□□□□□ -0.28
COMMD4-221ENST00000567935 ISYNA1Q9NPH2 558 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF229Q9UJW7 825 aa13.28□□□□□ -0.28
COMMD4-221ENST00000567935 EXOGQ9Y2C4 368 aaKnown RBP13.28□□□□□ -0.28
COMMD4-221ENST00000567935 TRAV27A0A087WT01 109 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 IGLV3-32A0A0A0MS00 114 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 ANKUB1A6NFN9 424 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-221ENST00000567935 TP53I11O14683 189 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 SCO2O43819 266 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 TNFSF15O95150 251 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 NUDT14O95848 222 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 CH25HO95992 272 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 BCL10O95999 233 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 MT-ATP6P00846 226 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-221ENST00000567935 COX6A1P12074 109 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 ICAM2P13598 275 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 PCSK6P29122 969 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 TGFBR2P37173 567 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 FOXL2P58012 376 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 ROR2Q01974 943 aaKnown RBP13.27□□□□□ -0.29
COMMD4-221ENST00000567935 DYNC1I2Q13409 638 aaKnown RBP13.27□□□□□ -0.29
COMMD4-221ENST00000567935 SPHARQ15513 63 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 ZNF74Q16587 644 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 CTF1Q16619 201 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 NTRK2Q16620 822 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 BTBD16Q32M84 506 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 ARMCX4Q5H9R4 360 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 TMEM81Q6P7N7 255 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 LINC00299Q6ZSB3 139 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 OR9Q1Q8NGQ5 310 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 OR6S1Q8NH40 331 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 STK35Q8TDR2 534 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 C8orf44Q96CB5 159 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 LGALS12Q96DT0 336 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 SH3YL1Q96HL8 342 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-221ENST00000567935 TNFRSF13CQ96RJ3 184 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 MGLLQ99685 303 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 NAA50Q9GZZ1 169 aaKnown RBP13.27□□□□□ -0.29
COMMD4-221ENST00000567935 FKRPQ9H9S5 495 aa13.27□□□□□ -0.29
COMMD4-221ENST00000567935 HINT3Q9NQE9 182 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms