RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	THOC1	Q96FV9	657 aa	Known RBP	6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	PIF1	Q9H611	641 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	DLL4	Q9NR61	685 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	ASB6	Q9NWX5	421 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	VAPA	Q9P0L0	249 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLAMF8	Q9P0V8	285 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	TRIM33	Q9UPN9	1127 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	CORO2B	Q9UQ03	480 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	CHST2	Q9Y4C5	530 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	RNF115	Q9Y4L5	304 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	FLVCR1	Q9Y5Y0	555 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	GMEB1	Q9Y692	573 aa		6.11	□□□□□ -1.43
SF3B3-209	ENST00000567635	CIB4	A0PJX0	185 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	DPRX	A6NFQ7	191 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	OR5H1	A6NKK0	313 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	CLOCK	O15516	846 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	AKR7A3	O95154	331 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	ARAF	P10398	606 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	COX5A	P20674	150 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC6A2	P23975	617 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	MNAT1	P51948	309 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	HOXC5	Q00444	222 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	CDK6	Q00534	326 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	FAP	Q12884	760 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	OR7A5	Q15622	319 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	STK11	Q15831	433 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	RUNDC3A	Q59EK9	446 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	OTUD3	Q5T2D3	398 aa	Predicted RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	C1orf140	Q5VVS0	124 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	METTL21C	Q5VZV1	264 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	OR7E24	Q6IFN5	339 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	DLEU7	Q6UYE1	221 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	ATG4D	Q86TL0	474 aa	Predicted RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	SERPINA11	Q86U17	422 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM99	Q8N816	258 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	LILRB1	Q8NHL6	650 aa	Predicted RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	MFSD8	Q8NHS3	518 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	STK35	Q8TDR2	534 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	TSPEAR	Q8WU66	669 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM171	Q8WVE6	324 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	IGFBPL1	Q8WX77	278 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	KCTD12	Q96CX2	325 aa	Known RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	MUS81	Q96NY9	551 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF317	Q96PQ6	595 aa	Predicted RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	CCT8L2	Q96SF2	557 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF607	Q96SK3	696 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	BDH2	Q9BUT1	245 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	SPATA5L1	Q9BVQ7	753 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	SF3B5	Q9BWJ5	86 aa	Known RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	TAPBPL	Q9BX59	468 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	GSX2	Q9BZM3	304 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM38A	Q9H6F2	299 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	NPHS2	Q9NP85	383 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	UPB1	Q9UBR1	384 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	RPS6KB2	Q9UBS0	482 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	LEF1	Q9UJU2	399 aa	Predicted RBP	6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	DCTN4	Q9UJW0	460 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	SLC9A8	Q9Y2E8	581 aa		6.1	□□□□□ -1.43
SF3B3-209	ENST00000567635	TRBV5-3	A0A0A0MS03	114 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRORSD1P	A6NEY8	169 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	AQP7P3	A6NL99	342 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	TMEM229A	B2RXF0	380 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	FRS3	O43559	492 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	EDF1	O60869	148 aa	Known RBP	6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	NPIPB7	O75200	414 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	SERPINB7	O75635	380 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	RAD51D	O75771	328 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	VAMP5	O95183	116 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	FAM107A	O95990	144 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	INHBB	P09529	407 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	PAX1	P15863	534 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	DRD4	P21917	467 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	PRKAR1B	P31321	381 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	PTH2R	P49190	550 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	SEC24C	P53992	1094 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	TGFBR3	Q03167	851 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	BSPH1	Q075Z2	132 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	SCARB2	Q14108	478 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	ADRM1	Q16186	407 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	ELOA3B	Q3SY89	546 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZNF672	Q499Z4	452 aa	Predicted RBP	6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635		Q5PR19	223 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	C1QTNF12	Q5T7M4	302 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	DHRS4L2	Q6PKH6	230 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	KLHL17	Q6TDP4	642 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	SEZ6L2	Q6UXD5	910 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	CASP12	Q6UXS9	341 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	THSD4	Q6ZMP0	1018 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	AAED1	Q7RTV5	226 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	YTHDF3	Q7Z739	585 aa	Known RBP	6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	BIVM	Q86UB2	503 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	GPAT4	Q86UL3	456 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	KRTAP1-3	Q8IUG1	177 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	C10orf111	Q8N326	155 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	DPP10	Q8N608	796 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	LSMEM1	Q8N8F7	131 aa		6.09	□□□□□ -1.43
SF3B3-209	ENST00000567635	ZIC4	Q8N9L1	334 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms