RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NCF2P19878 526 aaPredicted RBP12.89□□□□□ -0.35
FANCA-220ENST00000566409 HTR2AP28223 471 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 GABRA6Q16445 453 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 OTUD3Q5T2D3 398 aaPredicted RBP12.89□□□□□ -0.35
FANCA-220ENST00000566409 GCNT6Q5T4J0 391 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 TSPO2Q5TGU0 170 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 C1orf140Q5VVS0 124 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 CASP12Q6UXS9 341 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 RETREG3Q86VR2 466 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 OR9K2Q8NGE7 335 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 TMEM171Q8WVE6 324 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 STON2Q8WXE9 905 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 SLC35B4Q969S0 331 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 Q96MF0 132 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 WFDC6Q9BQY6 131 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 PTDSS2Q9BVG9 487 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 SLC9A8Q9Y2E8 581 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 SLC25A15Q9Y619 301 aa12.89□□□□□ -0.35
FANCA-220ENST00000566409 JMJD1CQ15652 2540 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 SHISA9B4DS77 424 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 OVOL3O00110 214 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 EDF1O60869 148 aaKnown RBP12.88□□□□□ -0.35
FANCA-220ENST00000566409 PRKAR1BP31321 381 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 CDK6Q00534 326 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 SELPLGQ14242 412 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 PGGHGQ32M88 737 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 ZNF672Q499Z4 452 aaPredicted RBP12.88□□□□□ -0.35
FANCA-220ENST00000566409 RUNDC3AQ59EK9 446 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 C9orf135Q5VTT2 229 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 REEP3Q6NUK4 255 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
FANCA-220ENST00000566409 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 OR52N5Q8NH56 324 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 TMEM45BQ96B21 275 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 MUCL1Q96DR8 90 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 CPPED1Q9BRF8 314 aaPredicted RBP12.88□□□□□ -0.35
FANCA-220ENST00000566409 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 TMEM38AQ9H6F2 299 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 ARMC7Q9H6L4 198 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 ADPRHL2Q9NX46 363 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 TAS2R16Q9NYV7 291 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 DCTN4Q9UJW0 460 aa12.88□□□□□ -0.35
FANCA-220ENST00000566409 CIB4A0PJX0 185 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 TPST2O60704 377 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 CD8AP01732 235 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 PPIBP23284 216 aaKnown RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 IRX1P78414 480 aaPredicted RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 SLC25A3Q00325 362 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 LGALS3BPQ08380 585 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 DHRS4L2Q6PKH6 230 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 BIVMQ86UB2 503 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 GPAT4Q86UL3 456 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 PTOV1Q86YD1 416 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 DPP10Q8N608 796 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 STK35Q8TDR2 534 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 SMAP2Q8WU79 429 aaPredicted RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 KTI12Q96EK9 354 aaPredicted RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 COX4I2Q96KJ9 171 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 SF3B5Q9BWJ5 86 aaKnown RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 PARPBPQ9NWS1 579 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 SEC14L4Q9UDX3 406 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 MAGED1Q9Y5V3 778 aaPredicted RBP12.87□□□□□ -0.35
FANCA-220ENST00000566409 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
FANCA-220ENST00000566409 SONP18583 2426 aaKnown RBP12.86□□□□□ -0.35
FANCA-220ENST00000566409 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 A0A1B0GWA3 101 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 H7C1Q1 480 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 ABCD4O14678 606 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 FZD7O75084 574 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 AQP1P29972 269 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 DMTNQ08495 405 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 SPOCK1Q08629 439 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 SCARB2Q14108 478 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 C6orf89Q6UWU4 347 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 CREB3L2Q70SY1 520 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 AAED1Q7RTV5 226 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 KDM8Q8N371 416 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 MFSD8Q8NHS3 518 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 C1QTNF6Q9BXI9 259 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 RABEP2Q9H5N1 569 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 PIF1Q9H611 641 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
FANCA-220ENST00000566409 CISD1Q9NZ45 108 aaKnown RBP12.86□□□□□ -0.35
FANCA-220ENST00000566409 UPB1Q9UBR1 384 aa12.86□□□□□ -0.35
FANCA-220ENST00000566409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms