RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TAS2R1Q9NYW7 299 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 CLEC4AQ9UMR7 237 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 PRPF19Q9UMS4 504 aaKnown RBP18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 SAMD4AQ9UPU9 718 aaKnown RBP18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 SNX13Q9Y5W8 968 aa18.77■□□□□ 0.59
SHCBP1-205ENST00000566016 UBOX5O94941 541 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 OR5F1O95221 314 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 LYPD3O95274 346 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 THY1P04216 161 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 IFNW1P05000 195 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 THRBP10828 461 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 TCN1P20061 433 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 KLK2P20151 261 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 OR1E2P47887 323 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 OR7A5Q15622 319 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 IFI44LQ53G44 452 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 TMEM201Q5SNT2 666 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 RINLQ6ZS11 566 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 KTI12Q96EK9 354 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 HSH2DQ96JZ2 352 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 SLC19A3Q9BZV2 496 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 EMC3Q9P0I2 261 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 SLC7A7Q9UM01 511 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 PROCRQ9UNN8 238 aa18.76■□□□□ 0.59
SHCBP1-205ENST00000566016 NBPF19A0A087WUL8 3843 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 TRAV36DV7A0A075B6V5 113 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 AQP7P3A6NL99 342 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF716A6NP11 495 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 GPR171O14626 319 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 SORDQ00796 357 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 MFSD13AQ14CX5 517 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 SP5Q6BEB4 398 aaPredicted RBP18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 DEF8Q6ZN54 512 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 TUSC5Q8IXB3 177 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 DNAJA3Q96EY1 480 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 SLC41A3Q96GZ6 507 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 PRRC1Q96M27 445 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 MUC13Q9H3R2 512 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 SLC24A3Q9HC58 644 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 ITPR2Q14571 2701 aa18.75■□□□□ 0.59
SHCBP1-205ENST00000566016 ABCA12Q86UK0 2595 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF814B7Z6K7 855 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 ARPC2O15144 300 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 SMNDC1O75940 238 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 RPS5P46782 204 aaKnown RBP18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 TAS2R41P59536 307 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 OTUD3Q5T2D3 398 aaPredicted RBP18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 WDR88Q6ZMY6 472 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 FKBP9P1Q75LS8 142 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 LUZP2Q86TE4 346 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 KIF18BQ86Y91 864 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 RNF217Q8TC41 542 aa18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 SF3B5Q9BWJ5 86 aaKnown RBP18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 RBM24Q9BX46 236 aaKnown RBP18.74■□□□□ 0.59
SHCBP1-205ENST00000566016 VAMP5O95183 116 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 COL8A1P27658 744 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 IFNA8P32881 189 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 RBM34P42696 430 aaKnown RBP18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 P2RY4P51582 365 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 SLC17A1Q14916 467 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 GDF7Q7Z4P5 450 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 STK32CQ86UX6 486 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 LSRQ86X29 649 aaPredicted RBP18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 CCDC103Q8IW40 242 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 TAAR8Q969N4 342 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 AMBRA1Q9C0C7 1298 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 GALNT8Q9NY28 637 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 RIMS3Q9UJD0 308 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 CORINQ9Y5Q5 1042 aa18.73■□□□□ 0.59
SHCBP1-205ENST00000566016 RAMP1O60894 148 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 AKR7A3O95154 331 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 IGF2P01344 180 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 GTF2E2P29084 291 aaKnown RBP18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 PIN1Q13526 163 aaPredicted RBP18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 DNAL1Q4LDG9 190 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF474Q6S9Z5 364 aaPredicted RBP18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 DMRTC2Q8IXT2 367 aaPredicted RBP18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 OFCC1Q8IZS5 231 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 TMEM99Q8N816 258 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 ADPRHL1Q8NDY3 354 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 NSMCE2Q96MF7 247 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF300Q96RE9 604 aaPredicted RBP18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 PRSS27Q9BQR3 290 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 OPN3Q9H1Y3 402 aaPredicted RBP18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 ELOVL5Q9NYP7 299 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 ACTR3BQ9P1U1 418 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 A4GNTQ9UNA3 340 aa18.72■□□□□ 0.59
SHCBP1-205ENST00000566016 HNRNPRO43390 633 aaKnown RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 MT-ATP6P00846 226 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 COX6B1P14854 86 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 UQCRC1P31930 480 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 MSX2P35548 267 aaPredicted RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 ST3GAL3Q11203 375 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 POU4F3Q15319 338 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 TTC33Q6PID6 262 aaPredicted RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 TFAP2EQ6VUC0 442 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 GALNT5Q7Z7M9 940 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 SCAIQ8N9R8 606 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 ZNF610Q8N9Z0 462 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 RASD1Q9Y272 281 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms