RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ARL5BQ96KC2 179 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 TEX12Q9BXU0 123 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 ADNPQ9H2P0 1102 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 TMEM185BQ9H7F4 350 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 NDUFB2O95178 105 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 CHN2P52757 468 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 RPS4XP62701 263 aaKnown RBP16.91■□□□□ 0.3
COMMD4-213ENST00000565834 ANKDD1AQ495B1 522 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 ACSM5Q6NUN0 579 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 NANOGNBQ7Z5D8 188 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-213ENST00000565834 ZADH2Q8N4Q0 377 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 ZFP62Q8NB50 900 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-213ENST00000565834 PRRG3Q9BZD7 231 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 RNF6Q9Y252 685 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 PTPRQQ9UMZ3 2332 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 FAM166BA8MTA8 275 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 GLSO94925 669 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-213ENST00000565834 SLC6A6P31641 620 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 IDUAP35475 653 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 CLK1P49759 484 aaKnown RBP16.9■□□□□ 0.3
COMMD4-213ENST00000565834 PRPS1P60891 318 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 MFSD13AQ14CX5 517 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 MAD2L1BPQ15013 274 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-213ENST00000565834 PGGHGQ32M88 737 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 GXYLT1Q4G148 440 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 SLC6A19Q695T7 634 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 IGFL3Q6UXB1 125 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 THSD4Q6ZMP0 1018 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 ENTHD1Q8IYW4 607 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 OR4Q3Q8NH05 313 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 MFSD8Q8NHS3 518 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 IFT27Q9BW83 186 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 ENKD1Q9H0I2 346 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 RASSF1Q9NS23 344 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 HIF3AQ9Y2N7 669 aa16.9■□□□□ 0.3
COMMD4-213ENST00000565834 C1QTNF9BB2RNN3 333 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 BLOC1S5-TXNDC5H3BN57 136 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 MKRN2OSH3BPM6 223 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 M0R129 80 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 C1QTNF9P0C862 333 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 GTF2E2P29084 291 aaKnown RBP16.89■□□□□ 0.29
COMMD4-213ENST00000565834 SFTPDP35247 375 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 CD97P48960 835 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 B3GALT5-AS1P59052 145 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 MYBPC1Q00872 1141 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 MYBPHQ13203 477 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 HYAL4Q2M3T9 481 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 CTU2Q2VPK5 515 aaKnown RBP16.89■□□□□ 0.29
COMMD4-213ENST00000565834 WIPI1Q5MNZ9 446 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-213ENST00000565834 ZNF786Q8N393 782 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 FBLIM1Q8WUP2 373 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 UBE2FQ969M7 185 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 SFXN2Q96NB2 322 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 SLC38A2Q96QD8 506 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 TAPBPLQ9BX59 468 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 ASPNQ9BXN1 380 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 NDEL1Q9GZM8 345 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 TVP23BQ9NYZ1 205 aa16.89■□□□□ 0.29
COMMD4-213ENST00000565834 FTCDNL1E5RQL4 147 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 ACOT7O00154 380 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 MPZL2O60487 215 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 OPN1LWP04000 364 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 HPNP05981 417 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 GRPRP30550 384 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 RPL4P36578 427 aaKnown RBP16.88■□□□□ 0.29
COMMD4-213ENST00000565834 PPIAP62937 165 aaKnown RBP16.88■□□□□ 0.29
COMMD4-213ENST00000565834 OR7A5Q15622 319 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 TMEM176BQ3YBM2 270 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-213ENST00000565834 UNQ6494/PRO21346Q6UXR6 183 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 PTCHD4Q6ZW05 846 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 SLC22A16Q86VW1 577 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 TMEM251Q8N6I4 163 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 FAM98AQ8NCA5 519 aaKnown RBP16.88■□□□□ 0.29
COMMD4-213ENST00000565834 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 CNIH3Q8TBE1 160 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 OR5B2Q96R09 309 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 ZNF226Q9NYT6 803 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 BAIAP2Q9UQB8 552 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 HDGFL3Q9Y3E1 203 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 CORINQ9Y5Q5 1042 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 LIPT2A6NK58 231 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 BHLHE40O14503 412 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 HMGN1P05114 100 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 IMPDH2P12268 514 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 SHC1P29353 583 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 UQCRC1P31930 480 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 AQP2P41181 271 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 MAGEA5P43359 124 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 PCYT1AP49585 367 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 RAC1P63000 192 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 CDK5R2Q13319 367 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 SNAPC1Q16533 368 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 SGCBQ16585 318 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 LNX2Q8N448 690 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 MOSPD2Q8NHP6 518 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 RHOXF1Q8NHV9 184 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 TRUB1Q8WWH5 349 aaKnown RBP16.88■□□□□ 0.29
COMMD4-213ENST00000565834 SMPDL3BQ92485 455 aa16.88■□□□□ 0.29
COMMD4-213ENST00000565834 POLDIP3Q9BY77 421 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms