RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SLX1AQ9BQ83 275 aa7□□□□□ -1.29
CDH1-208ENST00000565810 FUZQ9BT04 418 aa7□□□□□ -1.29
CDH1-208ENST00000565810 RBM4Q9BWF3 364 aaKnown RBP7□□□□□ -1.29
CDH1-208ENST00000565810 DGCR6LQ9BY27 220 aa7□□□□□ -1.29
CDH1-208ENST00000565810 PRRG4Q9BZD6 226 aa7□□□□□ -1.29
CDH1-208ENST00000565810 PRDM14Q9GZV8 571 aa7□□□□□ -1.29
CDH1-208ENST00000565810 RASSF4Q9H2L5 321 aa7□□□□□ -1.29
CDH1-208ENST00000565810 VCXQ9H320 206 aa7□□□□□ -1.29
CDH1-208ENST00000565810 VCX3BQ9H321 246 aa7□□□□□ -1.29
CDH1-208ENST00000565810 MEPEQ9NQ76 525 aaPredicted RBP7□□□□□ -1.29
CDH1-208ENST00000565810 C8orf4Q9NR00 106 aa7□□□□□ -1.29
CDH1-208ENST00000565810 VNN3Q9NY84 501 aa7□□□□□ -1.29
CDH1-208ENST00000565810 ENOPH1Q9UHY7 261 aa7□□□□□ -1.29
CDH1-208ENST00000565810 ZNF229Q9UJW7 825 aa7□□□□□ -1.29
CDH1-208ENST00000565810 ORC6Q9Y5N6 252 aa7□□□□□ -1.29
CDH1-208ENST00000565810 CACNA1GO43497 2377 aa7□□□□□ -1.29
CDH1-208ENST00000565810 BOD1L1Q8NFC6 3051 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 DSPP15924 2871 aaKnown RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 CACNA1BQ00975 2339 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 UNC119BA6NIH7 251 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 LIPT2A6NK58 231 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 H0YC42 278 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PDLIM1O00151 329 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 CXCL13O43927 109 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PIP5K1CO60331 668 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 WDR1O75083 606 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 VAMP5O95183 116 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 RCBTB2O95199 551 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 BGLAPP02818 100 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 HOXD4P09016 255 aaPredicted RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 IMPDH2P12268 514 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 POU2F1P14859 743 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 CDH2P19022 906 aaPredicted RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 PRKACGP22612 351 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 FPR3P25089 353 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 GRPRP30550 384 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 GPR4P46093 362 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 ALDH3A2P51648 485 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 TDGF1P3P51864 188 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 TPD52P55327 224 aaPredicted RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 CLDN15P56746 228 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 IL1RL1Q01638 556 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PMS2P3Q13401 168 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 DAG1Q14118 895 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 ANKDD1AQ495B1 522 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 GXYLT1Q4G148 440 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PRR30Q53SZ7 412 aaPredicted RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 TMEM225Q6GV28 225 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 ZNF585AQ6P3V2 769 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PGBD2Q6P3X8 592 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PAQR6Q6TCH4 344 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 H1FNTQ75WM6 255 aaPredicted RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 NANOGNBQ7Z5D8 188 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 OAFQ86UD1 273 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 HS3ST5Q8IZT8 346 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 ST6GALNAC3Q8NDV1 305 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 OR5M9Q8NGP3 310 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 OR5J2Q8NH18 312 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 ZPLD1Q8TCW7 415 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 LIPHQ8WWY8 451 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 GTPBP3Q969Y2 492 aaKnown RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 ADGRG7Q96K78 797 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 CIB1Q99828 191 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PSD2Q9BQI7 771 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PTDSS2Q9BVG9 487 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 UCK2Q9BZX2 261 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 GABARAPL1Q9H0R8 117 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 COQ10BQ9H8M1 238 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 PAPOLBQ9NRJ5 636 aaKnown RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 C20orf141Q9NUB4 165 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 MRPL39Q9NYK5 338 aaKnown RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 TNFRSF10DQ9UBN6 386 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 B3GALT5Q9Y2C3 310 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 MAGED1Q9Y5V3 778 aaPredicted RBP6.99□□□□□ -1.29
CDH1-208ENST00000565810 NINQ8N4C6 2090 aa6.99□□□□□ -1.29
CDH1-208ENST00000565810 FTCDNL1E5RQL4 147 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 LRRN3E7EW58 273 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 BLOC1S5-TXNDC5H3BN57 136 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 M0R082 166 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 CASQ2O14958 399 aaPredicted RBP6.98□□□□□ -1.29
CDH1-208ENST00000565810 RNF13O43567 381 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 WISP2O76076 250 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 ASAH2BP0C7U1 165 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 ADORA3P0DMS8 318 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 FCGR2AP12318 317 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 MAKP20794 623 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 AHCYP23526 432 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 IGFBP5P24593 272 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 GSSP48637 474 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 DAPP51397 102 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 AGFG1P52594 562 aaKnown RBP6.98□□□□□ -1.29
CDH1-208ENST00000565810 RAD23AP54725 363 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 PRPS1P60891 318 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 LSM11P83369 360 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDH1-208ENST00000565810 LTBQ06643 244 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 PON3Q15166 354 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 SNCBQ16143 134 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 C3AR1Q16581 482 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 LRRC36Q1X8D7 754 aa6.98□□□□□ -1.29
CDH1-208ENST00000565810 CTU2Q2VPK5 515 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms