RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TPI1P60174 286 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 MAGOHP61326 146 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 DLK1P80370 383 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SKP2Q13309 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 KRR1Q13601 381 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 NFATC4Q14934 902 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SOWAHAQ2M3V2 549 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 GTDC1Q4AE62 458 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 HIST2H3PS2Q5TEC6 136 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 C22orf42Q6IC83 251 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 RPL13AP3Q6NVV1 102 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 METTL7BQ6UX53 244 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 HACD2Q6Y1H2 254 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CCNI2Q6ZMN8 369 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 ZNF572Q7Z3I7 529 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 TMPRSS11BQ86T26 416 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ZNF605Q86T29 641 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 IGFN1Q86VF2 1251 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 TMPRSS12Q86WS5 348 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SKA3Q8IX90 412 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 LRRC56Q8IYG6 542 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 TMEM217Q8N7C4 229 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 OR9Q2Q8NGE9 314 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 OR56A1Q8NGH5 318 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 RNF133Q8WVZ7 376 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CASKIN2Q8WXE0 1202 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 TMEM37Q8WXS4 190 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 GTF3AQ92664 365 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 TSACCQ96A04 125 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 ZBTB8AQ96BR9 441 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 TGS1Q96RS0 853 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 TMEM209Q96SK2 561 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 TSNAXQ99598 290 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 URM1Q9BTM9 101 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 MND1Q9BWT6 205 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DHX35Q9H5Z1 703 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 SLA2Q9H6Q3 261 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 L2HGDHQ9H9P8 463 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 LRRC4Q9HBW1 653 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 PARD6AQ9NPB6 346 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ISYNA1Q9NPH2 558 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 C2orf42Q9NWW7 574 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DKKL1Q9UK85 242 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 NDUFAF1Q9Y375 327 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 MMP24Q9Y5R2 645 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 X6R8D5 127 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 FNDC1Q4ZHG4 1894 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 MN1Q10571 1320 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 ZNF462Q96JM2 2506 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 LOC105371242A0A075B767 164 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 TRBV7-9A0A0J9YWB2 115 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 A0A1B0GV90 55 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 A0A1B0GW55 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ZC3H12DA2A288 527 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 HYKKA2RU49 373 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CXorf65A6NEN9 183 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CXorf49A8MYA2 514 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 LINC00587B1AMM8 73 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ZNF487B1APH4 448 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CLDN5O00501 218 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 B4GALT5O43286 388 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 LDB2O43679 373 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CHP2O43745 196 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SSNA1O43805 119 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 TTC4O95801 387 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SNAI1O95863 264 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 TCRBP04435 133 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ALDOBP05062 364 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 HIST1H2AGP0C0S8 130 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L2P0CJ85 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L3P0CJ86 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L4P0CJ87 422 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L5P0CJ88 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L6P0CJ89 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L7P0CJ90 424 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 COX4I1P13073 169 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 BMP5P22003 454 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 S100PP25815 95 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 GJC1P36383 396 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 COILP38432 576 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 RPL5P46777 297 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 EIF2B2P49770 351 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 GNG2P59768 71 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ARF6P62330 175 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 MRPS34P82930 218 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 FAM3AP98173 230 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 EGR4Q05215 589 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 PRKCDQ05655 676 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 IL10RBQ08334 325 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CRMP1Q14194 572 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SPCS2Q15005 226 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 EIF2S3LQ2VIR3 472 aaKnown RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 KCTD16Q68DU8 428 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 KIAA0895LQ68EN5 471 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUPD1Q68J44 220 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 FAHD2BQ6P2I3 314 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 DUX4L9Q6RFH8 374 aaPredicted RBP2.8□□□□□ -1.96
CHD9-216ENST00000565803 RPTNQ6XPR3 784 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 MBOAT1Q6ZNC8 495 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms