RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PTH2RP49190 550 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TFAP2EQ6VUC0 442 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MAMSTRQ6ZN01 415 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SMIM19Q96E16 107 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NRIP3Q9NQ35 241 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CES1P1Q9UKY3 287 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LHX6Q9UPM6 363 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MED31Q9Y3C7 131 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OR10H1Q9Y4A9 318 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 IFITM5A6NNB3 132 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 KCNAB3O43448 404 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GALR3O60755 368 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CLEC3AO75596 197 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PAK4O96013 591 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GABRA1P14867 456 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 AK4P27144 223 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 C4orf46Q504U0 113 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RD3Q7Z3Z2 195 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SPRED2Q7Z698 418 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TMED4Q7Z7H5 227 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ASPGQ86U10 573 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NRSN1Q8IZ57 195 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 S100A16Q96FQ6 103 aaKnown RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF578Q96N58 590 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 KRCC1Q9NPI7 259 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NOTCH4Q99466 2003 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 C17orf113A0A1B0GUU1 675 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ITPKBP27987 946 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NANOS3P60323 173 aaKnown RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SRSF5Q13243 272 aaKnown RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GRASPQ7Z6J2 395 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF511Q8NB15 262 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SCARB1Q8WTV0 552 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ASB12Q8WXK4 309 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 HSPA12BQ96MM6 686 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MBNL1Q9NR56 388 aaKnown RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OR5V1Q9UGF6 321 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF223Q9UK11 482 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TAS2R43P59537 309 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GK2Q14410 553 aaPredicted RBP18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 HACD4Q5VWC8 232 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LRRN1Q6UXK5 716 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TMEM64Q6YI46 380 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TMPRSS12Q86WS5 348 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CXorf40AQ8TE69 158 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 DUSP19Q8WTR2 217 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF514Q96K75 400 aaPredicted RBP18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LRRC3BQ96PB8 259 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NPAS1Q99742 590 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ULBP3Q9BZM4 244 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MFFQ9GZY8 342 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZCCHC4Q9H5U6 513 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TAS2R3Q9NYW6 316 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SPTBN5Q9NRC6 3674 aaKnown RBP18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LOC100509620A0A075B734 347 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CARNS1A5YM72 827 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 A8MXK9 166 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 KRBOX1C9JBD0 128 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PRKNO60260 465 aaPredicted RBP18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ADAM11O75078 769 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CSN2P05814 226 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RAP2BP61225 183 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MUC20Q8N307 709 aaPredicted RBP18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF681Q96N22 645 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC38A3Q99624 504 aa18.84■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GABARAPH6UMI1 98 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 FGF18O76093 207 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NGFRP08138 427 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GIPP09681 153 aaPredicted RBP18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF888P0CJ79 500 aaPredicted RBP18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 C4BPBP20851 252 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NNATQ16517 81 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NDUFAF6Q330K2 333 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 FAM69AQ5T7M9 428 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 METRNLQ641Q3 311 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF660Q6AZW8 331 aaPredicted RBP18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CMIPQ8IY22 773 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OR4E2Q8NGC2 313 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MRPS24Q96EL2 167 aaKnown RBP18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF768Q9H5H4 540 aaKnown RBP18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LDAHQ9H6V9 325 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GPN1Q9HCN4 374 aaPredicted RBP18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CALML5Q9NZT1 146 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OPN4Q9UHM6 478 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ACSL5Q9ULC5 683 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GPR34Q9UPC5 381 aa18.83■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NUP210Q8TEM1 1887 aaPredicted RBP18.83■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ZFPL1O95159 310 aa18.83■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RAG2P55895 527 aa18.83■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CSRP2Q16527 193 aa18.83■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SLC35F2Q8IXU6 374 aa18.83■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR2L5Q8NG80 312 aa18.83■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GXYLT2A0PJZ3 443 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PRR32B1ATL7 298 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR6V1Q8N148 313 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 COX18Q8N8Q8 333 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR10K1Q8NGX5 313 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SYNDIG1Q9H7V2 258 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 EXOSC3Q9NQT5 275 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms