RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 MXD4Q14582 209 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 GPNMBQ14956 572 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 IL17AQ16552 155 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 FAM106AQ4KMX7 169 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TCHHL1Q5QJ38 904 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 CLVS2Q5SYC1 327 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CCNJQ5T5M9 372 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 GPR107Q5VW38 600 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PLPP4Q5VZY2 271 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PM20D1Q6GTS8 502 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 REG3GQ6UW15 175 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 DLEU7Q6UYE1 221 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TMCO2Q7Z6W1 182 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 ADAMTSL2Q86TH1 951 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PRUNE1Q86TP1 453 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ASPGQ86U10 573 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 RALGPS2Q86X27 583 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 SLC13A5Q86YT5 568 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 CRLF3Q8IUI8 442 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 LAX1Q8IWV1 398 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CTAGE3PQ8IX95 158 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 Q8N9G6 341 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 SIDT2Q8NBJ9 832 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 CLEC1AQ8NC01 280 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 KIAA0895Q8NCT3 520 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 GRPEL2Q8TAA5 225 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 DTD2Q96FN9 168 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ZNF560Q96MR9 790 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ZNF559Q9BR84 538 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TMEM175Q9BSA9 504 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 OSBPL11Q9BXB4 747 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TEKT3Q9BXF9 490 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ZNF717Q9BY31 904 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 NMUR2Q9GZQ4 415 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 LRRC19Q9H756 370 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 RPF2Q9H7B2 306 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 VPS37BQ9H9H4 285 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 KCNK13Q9HB14 408 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 FBXO6Q9NRD1 293 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 POLE3Q9NRF9 147 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 DDX28Q9NUL7 540 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 TMEM9Q9P0T7 183 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ARMCX1Q9P291 453 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PSMC3IPQ9P2W1 217 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 ATP6V1HQ9UI12 483 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ZNF229Q9UJW7 825 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PTBP2Q9UKA9 531 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 RAB23Q9ULC3 237 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 POMPQ9Y244 141 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 KCNK6Q9Y257 313 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 EIF3LQ9Y262 564 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 CFL2Q9Y281 166 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PLEKHA6Q9Y2H5 1048 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 NOSIPQ9Y314 301 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 ALG6Q9Y672 507 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CFAP54Q96N23 3096 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 DOCK5Q9H7D0 1870 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 A0A1W2PQ72 361 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ANKDD1BA6NHY2 528 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CENPXA8MT69 81 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 C12orf71A8MTZ7 269 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 A8MU76 341 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ATP6V1G2-DDX39BF2Z307 99 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 H3BMQ9 156 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 TYROBPO43914 113 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ACSL4O60488 711 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ZNF254O75437 659 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CCNKO75909 580 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CLPXO76031 633 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 OR7A10O76100 309 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 YES1P07947 543 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 SERPINA6P08185 405 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 KRT7P08729 469 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 SP9P0CG40 484 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ADORA3P0DMS8 318 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ATF6P18850 670 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CYP3A5P20815 502 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 BGNP21810 368 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CD9P21926 228 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 DCKP27707 260 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 NMT1P30419 496 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 SFTPDP35247 375 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 NBL1P41271 181 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 RABIFP47224 123 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 AP2S1P53680 142 aaPredicted RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 TMBIM6P55061 237 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 PSMC5P62195 406 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 MRPS15P82914 257 aaKnown RBP3.16□□□□□ -1.9
CHD9-212ENST00000564641 CDKL1Q00532 357 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 PRKCEQ02156 737 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CDC20Q12834 499 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 LCP2Q13094 533 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 RUNX3Q13761 415 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 GNA13Q14344 377 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 GK3PQ14409 553 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 CDK10Q15131 360 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 MAPRE2Q15555 327 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 DUSP7Q16829 419 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 MARCH8Q5T0T0 291 aa3.16□□□□□ -1.9
CHD9-212ENST00000564641 ATAD3CQ5T2N8 411 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms