RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 C4orf17Q53FE4 359 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 FAM69AQ5T7M9 428 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 TTC33Q6PID6 262 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 CYP4Z1Q86W10 505 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 NAXEQ8NCW5 288 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 OR52J3Q8NH60 311 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 PFN4Q8NHR9 129 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 MFSD8Q8NHS3 518 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 WNT2BQ93097 391 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 MOGAT1Q96PD6 335 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 ZNF347Q96SE7 839 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 SLC19A3Q9BZV2 496 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 ANKRD19PQ9H560 264 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 RNF122Q9H9V4 155 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 VNN3Q9NY84 501 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 ERRFI1Q9UJM3 462 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 ZNF175Q9Y473 711 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 DOPEY1Q5JWR5 2465 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 DOCK7Q96N67 2140 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 TRAV36DV7A0A075B6V5 113 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 KPNA4O00629 521 aaPredicted RBP11.14□□□□□ -0.63
KARS-204ENST00000564578 CIB2O75838 187 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 RRM2P31350 389 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 IFNA8P32881 189 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 TIMP3P35625 211 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 LIMS1P48059 325 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 P2RY4P51582 365 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 HMGA2P52926 109 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 NUP107P57740 925 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 CSNK2A1P68400 391 aaPredicted RBP11.14□□□□□ -0.63
KARS-204ENST00000564578 SF3B4Q15427 424 aaKnown RBP eCLIP11.14□□□□□ -0.63
KARS-204ENST00000564578 OR7A5Q15622 319 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 PDSS1Q5T2R2 415 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 PODNL1Q6PEZ8 512 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 C5orf46Q6UWT4 87 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 CCDC103Q8IW40 242 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 RNF128Q8TEB7 428 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 ABHD3Q8WU67 409 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 ACOT11Q8WXI4 607 aaPredicted RBP11.14□□□□□ -0.63
KARS-204ENST00000564578 DUS3LQ96G46 650 aaKnown RBP11.14□□□□□ -0.63
KARS-204ENST00000564578 CCDC120Q96HB5 630 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 HS6ST2Q96MM7 605 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 TACO1Q9BSH4 297 aaKnown RBP11.14□□□□□ -0.63
KARS-204ENST00000564578 TIGARQ9NQ88 270 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 ING1Q9UK53 422 aaPredicted RBP11.14□□□□□ -0.63
KARS-204ENST00000564578 ALPK2Q86TB3 2170 aa11.14□□□□□ -0.63
KARS-204ENST00000564578 ARHGAP21Q5T5U3 1957 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 A0A1B0GUH1 482 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 DNPH1O43598 174 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 OR2T1O43869 369 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 PIP5K1CO60331 668 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 FKBP6O75344 327 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 AKR7A3O95154 331 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 GADD45GO95257 159 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 AHSA1O95433 338 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 BGLAPP02818 100 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 OR2B6P58173 313 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 ADORA2A-AS1P86434 159 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 LRRC17Q8N6Y2 441 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 TMEM99Q8N816 258 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 RAB3IPQ96QF0 476 aaPredicted RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 MCTS1Q9ULC4 181 aaKnown RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 LYVE1Q9Y5Y7 322 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 SPTAN1Q13813 2472 aaKnown RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 A0A0G2JNJ9 132 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 RCBTB2O95199 551 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 IGF2P01344 180 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 CBLP22681 906 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 SLC35A1P78382 337 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 SPIBQ01892 262 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 FOXF2Q12947 444 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 ZNF74Q16587 644 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 FGD3Q5JSP0 725 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 OR2T5Q6IEZ7 315 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 C16orf87Q6PH81 154 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 FCRLAQ7L513 359 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 SLC46A3Q7Z3Q1 461 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 NRMQ8IXM6 262 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 GCNT2Q8N0V5 402 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 OR2T29Q8NH02 315 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 RSRC1Q96IZ7 334 aaKnown RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 EPYCQ99645 322 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 ARMC1Q9NVT9 282 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 Q9UFV3 132 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 SLC5A6Q9Y289 635 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 MED31Q9Y3C7 131 aa11.13□□□□□ -0.63
KARS-204ENST00000564578 NCOA6Q14686 2063 aaPredicted RBP11.13□□□□□ -0.63
KARS-204ENST00000564578 SH3PXD2BA1X283 911 aa11.12□□□□□ -0.63
KARS-204ENST00000564578 ENO4A6NNW6 628 aa11.12□□□□□ -0.63
KARS-204ENST00000564578 EIF1BO60739 113 aaKnown RBP11.12□□□□□ -0.63
KARS-204ENST00000564578 CYTIPO60759 359 aa11.12□□□□□ -0.63
KARS-204ENST00000564578 ENTPD5O75356 428 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms