RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SYKP43405 635 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 VEGFCP49767 419 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 MEOX2P50222 304 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 SLC25A1P53007 311 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 EGFEM1PQ0D2K5 195 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 CCDC173Q0VFZ6 552 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 ARL6IP1Q15041 203 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 LRRC36Q1X8D7 754 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 LRRC31Q6UY01 552 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 PGAP1Q75T13 922 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 NUDCD3Q8IVD9 361 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 CCDC65Q8IXS2 484 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 CCDC148Q8NFR7 591 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 OR6C4Q8NGE1 309 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 RAPGEF5Q92565 580 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.94□□□□□ -2.1
CHD9-209ENST00000564255 FGGYQ96C11 551 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 PAGE5Q96GU1 130 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 ZNF578Q96N58 590 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 CENPKQ9BS16 269 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 NMUR2Q9GZQ4 415 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 MFFQ9GZY8 342 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 RPL36Q9Y3U8 105 aaKnown RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 FLVCR1Q9Y5Y0 555 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 COL5A2P05997 1499 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 TRBV11-1A0A0K0K1C0 115 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 OR2AG2A6NM03 316 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 K7N7A8 449 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 ZNF254O75437 659 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SERF1AO75920 110 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 STAMBPO95630 424 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 ANXA13P27216 316 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 AQP1P29972 269 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 YAP1P46937 504 aaKnown RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 KPNA2P52292 529 aaKnown RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 KCNJ2P63252 427 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 IL18Q14116 193 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 NSUN5P1Q3KNT7 163 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 UTF1Q5T230 341 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 OR52E8Q6IFG1 317 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SASS6Q6UVJ0 657 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 PAMR1Q6UXH9 720 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 STXBP4Q6ZWJ1 553 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 NRMQ8IXM6 262 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 OR4K14Q8NGD5 310 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 MCUR1Q96AQ8 359 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 IFT74Q96LB3 600 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SIGLEC12Q96PQ1 595 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 KIR2DL4Q99706 377 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SELENOIQ9C0D9 397 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SUDS3Q9H7L9 328 aaPredicted RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 AUNIPQ9H7T9 357 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 FOLH1BQ9HBA9 442 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 CRLF2Q9HC73 371 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 PHLPP2Q6ZVD8 1323 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 IGHV7-81A0A0B4J1V7 117 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SMIM28A0A1B0GU29 152 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 OR5B21A6NL26 309 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 L7N2F9 121 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 WRBO00258 174 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 WWP2O00308 870 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 BCL2L11O43521 198 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 UGT1A9O60656 530 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 OR2F2O95006 317 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 SEMG1P04279 462 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 FGF1P05230 155 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 GATA1P15976 413 aaPredicted RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 VDAC1P21796 283 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 GDF1P27539 372 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 DEKP35659 375 aaKnown RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 FDFT1P37268 417 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 MDH2P40926 338 aaKnown RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 PKNOX1P55347 436 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 RIPPLY3P57055 190 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 C21orf59P57076 290 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 TLE4Q04727 773 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 ALKBH6Q3KRA9 238 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 TMEM220Q6QAJ8 160 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 UNQ9370/PRO34162Q6UXP9 181 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 GSG1LQ6UXU4 331 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 HSDL2Q6YN16 418 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 Q6ZSR3 168 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 FRA10AC1Q70Z53 315 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 APOBEC3FQ8IUX4 373 aaKnown RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 PIANPQ8IYJ0 282 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 KLHL30-AS1Q8NEE0 82 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 ACMSDQ8TDX5 336 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 GAL3ST1Q99999 423 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 C11orf70Q9BRQ4 267 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 Q9H3A6 140 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 RBKSQ9H477 322 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 THUMPD1Q9NXG2 353 aaKnown RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 PSMC3IPQ9P2W1 217 aaPredicted RBP1.93□□□□□ -2.1
CHD9-209ENST00000564255 KIAA1257Q9ULG3 409 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 VANGL2Q9ULK5 521 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 KCNIP3Q9Y2W7 256 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 N6AMT1Q9Y5N5 214 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 THSD7BQ9C0I4 1608 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 UNC13AQ9UPW8 1703 aa1.93□□□□□ -2.1
CHD9-209ENST00000564255 IGKV1D-8A0A087WSZ0 117 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms