RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 K7EM74 188 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 AHSA1O95433 338 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MT-ATP6P00846 226 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 HPNP05981 417 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 RPSAP08865 295 aaKnown RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 CELA3AP09093 270 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 TFPIP10646 304 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 BMP7P18075 431 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 ELK4P28324 431 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MAGEA5P43359 124 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 SMSP52788 366 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 NUP107P57740 925 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 PLGLB1Q02325 96 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 C19orf57Q0VDD7 668 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 TBR1Q16650 682 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.15□□□□□ -0.946e-7■■■□□ 16
SMG1-208ENST00000563448 LAIR2Q6ISS4 152 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 KRT80Q6KB66 452 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 RPL13AP3Q6NVV1 102 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 SLC27A4Q6P1M0 643 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 UNQ6494/PRO21346Q6UXR6 183 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 ZADH2Q8N4Q0 377 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 SETD9Q8NE22 299 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MOSPD2Q8NHP6 518 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MFSD8Q8NHS3 518 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 CNIH3Q8TBE1 160 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 B4GALT7Q9UBV7 327 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 SPIN1Q9Y657 262 aaPredicted RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 PTPRQQ9UMZ3 2332 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 A0A087WV48 116 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 TRAV17A0A0B4J275 112 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 A0A1W2PNR3 127 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MCIDASD6RGH6 385 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 BLOC1S5-TXNDC5H3BN57 136 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 BHLHE40O14503 412 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 OR2T1O43869 369 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 NDUFB2O95178 105 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 GABRB1P18505 474 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 GRPRP30550 384 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 SFTPDP35247 375 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 IDUAP35475 653 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 AQP2P41181 271 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 UCNP55089 124 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 CDC42P60953 191 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 CDK5R2Q13319 367 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MAD2L1BPQ15013 274 aaPredicted RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 OR7A5Q15622 319 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 PGGHGQ32M88 737 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 TMEM176BQ3YBM2 270 aaPredicted RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 SLC6A19Q695T7 634 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 MAMDC2Q7Z304 686 aaPredicted RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 LRRC75AQ8NAA5 344 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 OR52L1Q8NGH7 329 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 SLC25A43Q8WUT9 341 aaPredicted RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 APH1BQ8WW43 257 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 NR1H4Q96RI1 486 aaPredicted RBP9.15□□□□□ -0.94
SMG1-208ENST00000563448 ADNPQ9H2P0 1102 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 RASSF1Q9NS23 344 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 PNPLA3Q9NST1 481 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 TVP23BQ9NYZ1 205 aa9.15□□□□□ -0.94
SMG1-208ENST00000563448 FRYQ5TBA9 3013 aa9.15□□□□□ -0.95
SMG1-208ENST00000563448 LOC400499M0QZD8 3231 aa9.15□□□□□ -0.95
SMG1-208ENST00000563448 CEP295Q9C0D2 2601 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 LIPT2A6NK58 231 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 FZD7O75084 574 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 PPP1R3DO95685 299 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 FKBP2P26885 142 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 UQCRC1P31930 480 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CLK1P49759 484 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 GFRA1P56159 465 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 PRPS1P60891 318 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 PPIAP62937 165 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 RAC1P63000 192 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 EFNB1P98172 346 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 PMP22Q01453 160 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 MYBPHQ13203 477 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 ANKDD1AQ495B1 522 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CASP12Q6UXS9 341 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 NANOGNBQ7Z5D8 188 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 IGFN1Q86VF2 1251 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CCDC103Q8IW40 242 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 DEPDC4Q8N2C3 294 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 OR2T33Q8NG76 320 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 OR5J2Q8NH18 312 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 RHOXF1Q8NHV9 184 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 SNRNP27Q8WVK2 155 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 TM9SF4Q92544 642 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 EXTL1Q92935 676 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 DTNBP1Q96EV8 351 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 SFXN2Q96NB2 322 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 OR5B2Q96R09 309 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 IFT27Q9BW83 186 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 TAS2R5Q9NYW4 299 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 SLC6A5Q9Y345 797 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 MKRN2OSH3BPM6 223 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 M0R082 166 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 PRKYO43930 277 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 WBP4O75554 376 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms