RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GPX7Q96SL4 187 aaPredicted RBP17.4■□□□□ 0.38
SMPD3-203ENST00000563226 SEMA4CQ9C0C4 833 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 INPP5EQ9NRR6 644 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 ETAA1Q9NY74 926 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 TEX13CA0A0J9YWL9 993 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 ARPC3O15145 178 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 YKT6O15498 198 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 RGS5O15539 181 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 RNF13O43567 381 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 NUDT14O95848 222 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 IGF2P01344 180 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 ASAH2BP0C7U1 165 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 PRPS1P60891 318 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 DAB2P98082 770 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 TRIM61Q5EBN2 209 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 STEAP3Q658P3 488 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 TMEM91Q6ZNR0 172 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 OVCH1Q7RTY7 1134 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 PPP1R3BQ86XI6 285 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 C17orf47Q8NEP4 570 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 LIPHQ8WWY8 451 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 TAAR8Q969N4 342 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 C4orf36Q96KX1 117 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 LPAR4Q99677 370 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 WDR77Q9BQA1 342 aaPredicted RBP17.4■□□□□ 0.38
SMPD3-203ENST00000563226 IQCMA0A1B0GVH7 501 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 MAGEB4O15481 346 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-203ENST00000563226 NAA10P41227 235 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-203ENST00000563226 RPS5P46782 204 aaKnown RBP17.39■□□□□ 0.37
SMPD3-203ENST00000563226 OR12D2P58182 307 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 PSPHP78330 225 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 BDH1Q02338 343 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 FAM69BQ5VUD6 431 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 C1QL3Q5VWW1 255 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 LYPD4Q6UWN0 246 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 ZC3H10Q96K80 434 aaKnown RBP17.39■□□□□ 0.37
SMPD3-203ENST00000563226 LRFN5Q96NI6 719 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 SPSB2Q99619 263 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 SDHCQ99643 169 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-203ENST00000563226 MED18Q9BUE0 208 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 SMOC1Q9H4F8 434 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 TBCCD1Q9NVR7 557 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 GSTK1Q9Y2Q3 226 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 PCDHGB6Q9Y5F9 930 aa17.39■□□□□ 0.37
SMPD3-203ENST00000563226 VSTM2BA6NLU5 285 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 J3QLW9 94 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 EIF4E2O60573 245 aaKnown RBP17.38■□□□□ 0.37
SMPD3-203ENST00000563226 HLA-DPB1P04440 258 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 F13BP05160 661 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF19P17023 458 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 UQCRC1P31930 480 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 EMP2P54851 167 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 RAB15P59190 212 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 E2F1Q01094 437 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 LPAL2Q16609 132 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 SPANXN2Q5MJ10 180 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 PAPD4Q6PIY7 484 aaKnown RBP17.38■□□□□ 0.37
SMPD3-203ENST00000563226 RPTNQ6XPR3 784 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 PLEKHG7Q6ZR37 379 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 FAM122BQ7Z309 247 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 OR5W2Q8NH69 310 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 C8orf44Q96CB5 159 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 CEP19Q96LK0 163 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 GFM1Q96RP9 751 aaKnown RBP17.38■□□□□ 0.37
SMPD3-203ENST00000563226 SLC30A2Q9BRI3 323 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 NMNAT2Q9BZQ4 307 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 CCDC86Q9H6F5 360 aaKnown RBP17.38■□□□□ 0.37
SMPD3-203ENST00000563226 CPAMD8Q8IZJ3 1885 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 OR6C70A6NIJ9 312 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 CBFA2T3O75081 653 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 MT-ND5P03915 603 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 SPI1P17947 270 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 CDKN2AP42771 156 aaKnown RBP17.38■□□□□ 0.37
SMPD3-203ENST00000563226 FBXW4P57775 412 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 RUNX1T1Q06455 604 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 ALG10Q5BKT4 473 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 SLC22A16Q86VW1 577 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 OR5J2Q8NH18 312 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 GTPBP2Q9BX10 602 aaKnown RBP17.38■□□□□ 0.37
SMPD3-203ENST00000563226 C12orf10Q9HB07 376 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 TRIM36Q9NQ86 728 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 NPFFR2Q9Y5X5 522 aa17.38■□□□□ 0.37
SMPD3-203ENST00000563226 C2orf72A6NCS6 295 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 TMEM200CA6NKL6 621 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 B4DXG7 233 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 NCR1O76036 304 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 CTXN1P60606 82 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 RPL18Q07020 188 aaKnown RBP17.37■□□□□ 0.37
SMPD3-203ENST00000563226 POU4F2Q12837 409 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 GGTLC2Q14390 218 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF181Q2M3W8 571 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 LEG1Q6P5S2 330 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 ARL9Q6T311 187 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 TMEM105Q8N8V8 129 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 LSM14AQ8ND56 463 aaKnown RBP17.37■□□□□ 0.37
SMPD3-203ENST00000563226 METTL21AQ8WXB1 218 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 RELTQ969Z4 430 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 CNN2Q99439 309 aaKnown RBP17.37■□□□□ 0.37
SMPD3-203ENST00000563226 MIXL1Q9H2W2 232 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 MARCH7Q9H992 704 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms