RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CDCA4Q9BXL8 241 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 NAA50Q9GZZ1 169 aaKnown RBP16.34■□□□□ 0.21
COMMD4-208ENST00000563220 MED20Q9H944 212 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 MRPS18AQ9NVS2 196 aaKnown RBP16.34■□□□□ 0.21
COMMD4-208ENST00000563220 DLL3Q9NYJ7 618 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 ADAM18Q9Y3Q7 739 aa16.34■□□□□ 0.21
COMMD4-208ENST00000563220 EFNA2O43921 213 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 CDH11P55287 796 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 PRPS1P60891 318 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 TBCEQ15813 527 aaPredicted RBP16.33■□□□□ 0.21
COMMD4-208ENST00000563220 PLPPR5Q32ZL2 321 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 DCAF10Q5QP82 559 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 C1orf140Q5VVS0 124 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 UBE2UQ5VVX9 321 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 NXNL2Q5VZ03 156 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 POC1BQ8TC44 478 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 OTULINQ96BN8 352 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 LGALS12Q96DT0 336 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 TMEM80Q96HE8 168 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 FN3KQ9H479 309 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 OCEL1Q9H607 264 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 FKRPQ9H9S5 495 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 GPN2Q9H9Y4 310 aaPredicted RBP16.33■□□□□ 0.21
COMMD4-208ENST00000563220 NRIP3Q9NQ35 241 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF229Q9UJW7 825 aa16.33■□□□□ 0.21
COMMD4-208ENST00000563220 GVINP1Q7Z2Y8 2422 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 FREM2Q5SZK8 3169 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 G3V3Y1 287 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 APOL3O95236 402 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 PTHP01270 115 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 TSPAN19P0C672 248 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 HK1P19367 917 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 NOS3P29474 1203 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 RPL4P36578 427 aaKnown RBP16.33■□□□□ 0.2
COMMD4-208ENST00000563220 APOBEC1P41238 236 aaKnown RBP16.33■□□□□ 0.2
COMMD4-208ENST00000563220 ZNF41P51814 821 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-208ENST00000563220 FOXK1P85037 733 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 ITGADQ13349 1161 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 SLC25A53Q5H9E4 307 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 OR52I1Q8NGK6 324 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 STK35Q8TDR2 534 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 RNFT2Q96EX2 444 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 GPX7Q96SL4 187 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-208ENST00000563220 CLEC2DQ9UHP7 191 aa16.33■□□□□ 0.2
COMMD4-208ENST00000563220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.33■□□□□ 0.2
COMMD4-208ENST00000563220 SNTNA6NMZ2 147 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 H3BMQ9 156 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 ADORA3P0DMS8 318 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 HIST1H1CP16403 213 aaKnown RBP16.32■□□□□ 0.2
COMMD4-208ENST00000563220 IL11P20809 199 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 PSMB9P28065 219 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 UQCRC1P31930 480 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 MTNR1AP48039 350 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 ERVK-25P63136 954 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 CRMP1Q14194 572 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 PLCZ1Q86YW0 608 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 BEST3Q8N1M1 668 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 CYB561A3Q8NBI2 242 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 OR4K17Q8NGC6 315 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 SLC25A36Q96CQ1 311 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 C1GALT1C1Q96EU7 318 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 SGCZQ96LD1 299 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 COG8Q96MW5 612 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 SEC14L4Q9UDX3 406 aa16.32■□□□□ 0.2
COMMD4-208ENST00000563220 ARPC3O15145 178 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 TCEA1P23193 301 aaKnown RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 HTR1FP30939 366 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 TMBIM6P55061 237 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 RPL18Q07020 188 aaKnown RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 FAM69AQ5T7M9 428 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 ARHGAP11AQ6P4F7 1023 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 B3GLCTQ6Y288 498 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 ZNF227Q86WZ6 799 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 CROCCP3Q8IVE0 287 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 SLC37A3Q8NCC5 494 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 OR52E2Q8NGJ4 325 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 OR4K13Q8NH42 304 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 RFKQ969G6 155 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 MRGPRX4Q96LA9 322 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 KATNB1Q9BVA0 655 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 KLHL1Q9NR64 748 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 RYDENQ9NUL5 291 aaKnown RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 STMN3Q9NZ72 180 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 H2AFY2Q9P0M6 372 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 MPDZO75970 2070 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 RIIAD1A6NNX1 92 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 PRR23D1E9PI22 279 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 HIST1H2ABP04908 130 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 F13BP05160 661 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 PRR23D2P0DMB1 279 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 LIFP15018 202 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 RAB40BQ12829 278 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 DOC2BQ14184 412 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 TMEM44Q2T9K0 475 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 KLHL22Q53GT1 634 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 ALG10Q5BKT4 473 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 ATP1A1-AS1Q5TC04 95 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 JMJD6Q6NYC1 403 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-208ENST00000563220 NIPAL3Q6P499 406 aa16.31■□□□□ 0.2
COMMD4-208ENST00000563220 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms