RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 A0A0J9YW62 118 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 BICDL2A1A5D9 508 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 PRMT5O14744 637 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 ERI3O43414 337 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 PEX11AO75192 247 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ZNF189O75820 626 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 CDK2AP2O75956 126 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 PRKD3O94806 890 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 FGFR1OPO95684 399 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 CRYAAP02489 173 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ITGA5P08648 1049 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 KRT16P08779 473 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 PF4V1P10720 104 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 GPX3P22352 226 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 CALCRP30988 508 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 RAD52P43351 418 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 MTIF2P46199 727 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 EVX1P49640 407 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 FOXG1P55316 489 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 MAGOHP61326 146 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 STXBP1P61764 594 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 TUBA4AP68366 448 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 REEP5Q00765 189 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 NAAAQ02083 359 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 PAX2Q02962 417 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 LCP2Q13094 533 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 CYLC2Q14093 348 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 DHX34Q14147 1143 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 NNATQ16517 81 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 CCDC153Q494R4 210 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 PDCD4Q53EL6 469 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 CFAP157Q5JU67 520 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 OTUD3Q5T2D3 398 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 FBXW9Q5XUX1 488 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 HBMQ6B0K9 141 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 C3orf62Q6ZUJ4 267 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 FCRLAQ7L513 359 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 WDR75Q8IWA0 830 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 KLHDC8AQ8IYD2 350 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ZNF567Q8N184 647 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ARHGAP24Q8N264 748 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 TBC1D19Q8N5T2 526 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ZNF615Q8N8J6 731 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ACTRT1Q8TDG2 376 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 LRRC8CQ8TDW0 803 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 WIPF2Q8TF74 440 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 SLC35B4Q969S0 331 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 MAGOHBQ96A72 148 aaKnown RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 TMCO6Q96DC7 493 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 MS4A6EQ96DS6 147 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 C1GALT1C1Q96EU7 318 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 SLC38A2Q96QD8 506 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ERGIC2Q96RQ1 377 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 CGREF1Q99674 301 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 KCNS3Q9BQ31 491 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 PSD2Q9BQI7 771 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 FAM167BQ9BTA0 163 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 SRXN1Q9BYN0 137 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ROPN1BQ9BZX4 212 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 BRINP2Q9C0B6 783 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 P2RY12Q9H244 342 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ZNF385DQ9H6B1 395 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ROPN1Q9HAT0 212 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 SAR1AQ9NR31 198 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 KLHL8Q9P2G9 620 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 VPREB3Q9UKI3 123 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 ABCG2Q9UNQ0 655 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
TCF4-213ENST00000562543 FAT1Q14517 4588 aa4.8□□□□□ -1.64
TCF4-213ENST00000562543 A0A088AWK7 358 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 OR6C70A6NIJ9 312 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 CLDN25C9JDP6 229 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 RGS16O15492 202 aaPredicted RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 NPPBP16860 134 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 ZNF10P21506 573 aaPredicted RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 S100A1P23297 94 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 KIR2DS4P43632 304 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 PTDSS1P48651 473 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 GEMP55040 296 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 HPCAP84074 193 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 BIKQ13323 160 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 ZNF460Q14592 562 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 RAB39AQ14964 217 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 KRT72Q14CN4 511 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 KLHL38Q2WGJ6 581 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 CNPY1Q3B7I2 92 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 MMEL1Q495T6 779 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 LIN52Q52LA3 116 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 PHYHD1Q5SRE7 291 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 SLC9A4Q6AI14 798 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 PTRHD1Q6GMV3 140 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 ZNF534Q76KX8 674 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 NIPA2Q8N8Q9 360 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 C1orf162Q8NEQ5 155 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms