RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 RAB27BO00194 218 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PPP6CO00743 305 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MAGEB4O15481 346 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 LAMTOR5O43504 91 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TIMM8AO60220 97 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PCDH7O60245 1069 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 LRP3O75074 770 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 UGT2B11O75310 529 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 VIPP01282 170 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 C1QAP02745 245 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 APRTP07741 180 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FCGR1AP12314 374 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ACP5P13686 325 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SLC2A4P14672 509 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 B4GALT1P15291 398 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 HOXA5P20719 270 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PSMB4P28070 264 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 HOXD9P28356 352 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 RBMS1P29558 406 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 RPL22P35268 128 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PNPLA4P41247 253 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PTGFRP43088 359 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MAP2K4P45985 399 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 GNPDA1P46926 289 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 RGRP47804 291 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PPOXP50336 477 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 CHN2P52757 468 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 HSPA2P54652 639 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 DNAJB13P59910 316 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 LCN2P80188 198 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FOLH1Q04609 750 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FPGSQ05932 587 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 HYAL1Q12794 435 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 CCNIQ14094 377 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 KCNJ11Q14654 390 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 C16orf72Q14CZ0 275 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 CARTPTQ16568 116 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TATDN3Q17R31 274 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FAM214AQ32MH5 1076 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 POM121L1PQ3SYA9 428 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ZNF658BQ4V348 819 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SFT2D3Q587I9 215 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FGD3Q5JSP0 725 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PHF19Q5T6S3 580 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 OGFRL1Q5TC84 451 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SLC22A10Q63ZE4 541 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PMS2CLQ68D20 193 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TXNDC8Q6A555 127 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PLAG1Q6DJT9 500 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TMEM211Q6ICI0 200 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 OR52W1Q6IF63 320 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SLC27A4Q6P1M0 643 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ACSM6Q6P461 480 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 DNM1P34Q6PK57 102 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 UGT2A3Q6UWM9 527 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MBOAT1Q6ZNC8 495 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ACOT7LQ6ZUV0 252 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FCRLAQ7L513 359 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 DPY19L4Q7Z388 723 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 GRINAQ7Z429 371 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FAM220AQ7Z4H9 259 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ARPINQ7Z6K5 226 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 GPAT4Q86UL3 456 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ADIPOR2Q86V24 386 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 FAM90A1Q86YD7 464 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 WDFY1Q8IWB7 410 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 RDH10Q8IZV5 341 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 OR4N4Q8N0Y3 316 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TMEM132CQ8N3T6 1108 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 B3GNT7Q8NFL0 401 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MRAPQ8TCY5 172 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SFT2D1Q8WV19 159 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PIGCQ92535 297 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PTH2Q96A98 100 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 C12orf43Q96C57 262 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 OTUB1Q96FW1 271 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 CDKN2AIPNLQ96HQ2 116 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ZNF599Q96NL3 588 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 VAT1Q99536 393 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 GPR20Q99678 358 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TIMM29Q9BSF4 260 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TMEM121Q9BTD3 319 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 TMEM208Q9BTX3 173 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 THTPAQ9BU02 230 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 LMF2Q9BU23 707 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 PDCD10Q9BUL8 212 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MRIQ9BWK5 157 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MROQ9BYG7 248 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 MRPS26Q9BYN8 205 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SIK2Q9H0K1 926 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 RBM38Q9H0Z9 239 aaKnown RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ING2Q9H160 280 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ZNF696Q9H7X3 374 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 SYNPO2LQ9H987 977 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 ZNF556Q9HAH1 456 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 BARX1Q9HBU1 254 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-211ENST00000562199 POPDC2Q9HBU9 364 aa5.04□□□□□ -1.6
CAPN3-211ENST00000562199 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms