RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FAM69AQ5T7M9 428 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ATP6V1C2Q8NEY4 427 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ELOA3Q8NG57 546 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 OR6K3Q8NGY3 331 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ABHD3Q8WU67 409 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 LIPHQ8WWY8 451 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 POP5Q969H6 163 aaKnown RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 INTS12Q96CB8 462 aaKnown RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 TPD52L3Q96J77 140 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 NSMCE2Q96MF7 247 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 FUZQ9BT04 418 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 LRMDAQ9H2I8 198 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 NPDC1Q9NQX5 325 aaPredicted RBP11.96□□□□□ -0.49
CDH1-204ENST00000562118 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 NDUFAF4Q9P032 175 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 KLHL9Q9P2J3 617 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 RIMS3Q9UJD0 308 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 ENPP4Q9Y6X5 453 aa11.96□□□□□ -0.49
CDH1-204ENST00000562118 LOC102725191A0A1B0GVB3 256 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 A8MXE2 369 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 MSTNO14793 375 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 OR2T1O43869 369 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 RAMP1O60894 148 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 DNAJC8O75937 253 aaPredicted RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 PRKD3O94806 890 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 ZNF682O95780 498 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 TFPIP10646 304 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 FUT4P22083 530 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 MSX2P35548 267 aaPredicted RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 ASCL1P50553 236 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 VLDLRP98155 873 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 LTBQ06643 244 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 PIN1Q13526 163 aaPredicted RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 SLC17A1Q14916 467 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 GTF2IRD2BQ6EKJ0 949 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 VWA1Q6PCB0 445 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 NHLRC1Q6VVB1 395 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 ASRGL1Q7L266 308 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 PIWIL3Q7Z3Z3 882 aaKnown RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 P4HA3Q7Z4N8 544 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 GTF2IRD2Q86UP8 949 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 GCNT2Q8N0V5 402 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 SCAIQ8N9R8 606 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 PIK3C3Q8NEB9 887 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 PIGXQ8TBF5 258 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 CA5BP1Q8WTZ4 195 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 ROBO4Q8WZ75 1007 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 TAAR8Q969N4 342 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 PYURFQ96I23 114 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 CLPTM1LQ96KA5 538 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 SF3B5Q9BWJ5 86 aaKnown RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 CADM1Q9BY67 442 aaKnown RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 ENKD1Q9H0I2 346 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 ANKRD19PQ9H560 264 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 MEPEQ9NQ76 525 aaPredicted RBP11.95□□□□□ -0.5
CDH1-204ENST00000562118 SLC7A7Q9UM01 511 aa11.95□□□□□ -0.5
CDH1-204ENST00000562118 FLNBO75369 2602 aaKnown RBP11.94□□□□□ -0.5
CDH1-204ENST00000562118 IGHV3-15A0A0B4J1V0 119 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 HTR3EA5X5Y0 456 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 GYG2O15488 501 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 GSC2O15499 205 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 PDE5AO76074 875 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 AHSA1O95433 338 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 MT-ATP6P00846 226 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 YES1P07947 543 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 CCNA2P20248 432 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 FPR1P21462 350 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 BMP5P22003 454 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 ST3GAL3Q11203 375 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 MFSD13AQ14CX5 517 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 DEF8Q6ZN54 512 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 SLC46A3Q7Z3Q1 461 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 BTLAQ7Z6A9 289 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 NKAIN4Q8IVV8 208 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 TMEM45BQ96B21 275 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 ZHX1-C8orf76Q96EF9 292 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 ZNF300Q96RE9 604 aaPredicted RBP11.94□□□□□ -0.5
CDH1-204ENST00000562118 EPYCQ99645 322 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 THTPAQ9BU02 230 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 UCK2Q9BZX2 261 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 MMADHCQ9H3L0 296 aaPredicted RBP11.94□□□□□ -0.5
CDH1-204ENST00000562118 MAGIXQ9H6Y5 334 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 IL1RAPQ9NPH3 570 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 B3GAT1Q9P2W7 334 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
CDH1-204ENST00000562118 B3GALT5Q9Y2C3 310 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 CORINQ9Y5Q5 1042 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 FBN2P35556 2912 aa11.94□□□□□ -0.5
CDH1-204ENST00000562118 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 A0A1W2PRQ8 180 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 C19orf84I3L1E1 186 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 J3KTA2 159 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 GMNNO75496 209 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 VAMP5O95183 116 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 ASAH2BP0C7U1 165 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 RHCEP18577 417 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 GRNP28799 593 aaKnown RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 NTF4P34130 210 aa11.93□□□□□ -0.5
CDH1-204ENST00000562118 RPS5P46782 204 aaKnown RBP11.93□□□□□ -0.5
CDH1-204ENST00000562118 RASSF2P50749 326 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms