RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CLVS1Q8IUQ0 354 aaPredicted RBP7.43□□□□□ -1.22
PALB2-202ENST00000561514 ZNF527Q8NB42 609 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 KBTBD8Q8NFY9 601 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 OR10H5Q8NGA6 315 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 OR56A1Q8NGH5 318 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 OR5W2Q8NH69 310 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 SFXN5Q8TD22 340 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 CHAC2Q8WUX2 184 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 OIT3Q8WWZ8 545 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 NEUROG1Q92886 237 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
PALB2-202ENST00000561514 NSL1Q96IY1 281 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 PLEKHA8Q96JA3 519 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 CENPOQ9BU64 300 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 GON7Q9BXV9 100 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 NMUR2Q9GZQ4 415 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 RMND5AQ9H871 391 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 SCPEP1Q9HB40 452 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 ZCCHC3Q9NUD5 404 aaKnown RBP7.43□□□□□ -1.22
PALB2-202ENST00000561514 TMEM160Q9NX00 188 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 SH3BP4Q9P0V3 963 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 HAO1Q9UJM8 370 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.43□□□□□ -1.22
PALB2-202ENST00000561514 LIPT1Q9Y234 373 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 ERGIC3Q9Y282 383 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 RTTNQ86VV8 2226 aa7.43□□□□□ -1.22
PALB2-202ENST00000561514 A0A1W2PP18 115 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 OR5H1A6NKK0 313 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 FAM25AB3EWG3 89 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 FAM25CB3EWG5 89 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 FAM25GB3EWG6 89 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 H3BNH8 94 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 CLOCKO15516 846 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 AKAP10O43572 662 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 CYTIPO60759 359 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 CRCPO75575 148 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 KRT36O76013 467 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 H6PDO95479 791 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ADAP00813 363 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 HMGN1P05114 100 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 GUSBP08236 651 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 LAMP1P11279 417 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 EDNRAP25101 427 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 SFTPDP35247 375 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ACVR1BP36896 505 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 HPCAL1P37235 193 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 CDKN1AP38936 164 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 RPL3P39023 403 aaKnown RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 P2RX3P56373 397 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ACTR3P61158 418 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 RPL38P63173 70 aaKnown RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 STX3Q13277 289 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 SKP2Q13309 424 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 PCLAFQ15004 111 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ZNF141Q15928 474 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 NRF1Q16656 503 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 TMEM176BQ3YBM2 270 aaPredicted RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 TIMM23BQ5SRD1 257 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 C3orf33Q6P1S2 294 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 PODNL1Q6PEZ8 512 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 DHDDSQ86SQ9 333 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 RIMKLAQ8IXN7 391 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 NATD1Q8N6N6 113 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 FAM71CQ8NEG0 241 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 CLHC1Q8NHS4 586 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 PHOSPHO1Q8TCT1 267 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 OR5P2Q8WZ92 322 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 ST8SIA1Q92185 356 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 CDS1Q92903 461 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 COQ8BQ96D53 544 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 OTUB1Q96FW1 271 aaPredicted RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 REXO5Q96IC2 774 aaKnown RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 RADILQ96JH8 1075 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 COQ7Q99807 217 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 GATA5Q9BWX5 397 aaPredicted RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 ACTRT3Q9BYD9 372 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 MROQ9BYG7 248 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 TRIM15Q9C019 465 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 LIN7BQ9HAP6 207 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 NPAP1Q9NZP6 1156 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 MID2Q9UJV3 735 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 TMA7Q9Y2S6 64 aaKnown RBP7.42□□□□□ -1.22
PALB2-202ENST00000561514 DTNAQ9Y4J8 743 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 SPEF1Q9Y4P9 236 aa7.42□□□□□ -1.22
PALB2-202ENST00000561514 PCNX3Q9H6A9 2034 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 SHOXO15266 292 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 NPHS1O60500 1241 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 ADAM11O75078 769 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 NDUFS7O75251 213 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 LYPLA1O75608 230 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 ECDO95905 644 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 PAHP00439 452 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 AK1P00568 194 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 PRKACAP17612 351 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 IGHV1-2P23083 117 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 THBS2P35442 1172 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 CCT3P49368 545 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms