RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 LOC100289279A0A1B0GTE1 492 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 PRSS51A0A1B0GVH4 220 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC35F4A4IF30 521 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 TGDSO95455 350 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 IMPDH2P12268 514 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 CCNA2P20248 432 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 UQCRC2P22695 453 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 POLR2HP52434 150 aaKnown RBP10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 FUT5Q11128 374 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 GGTLC2Q14390 218 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 C9orf135Q5VTT2 229 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 SAXO2Q658L1 398 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 PAQR6Q6TCH4 344 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 KLHL24Q6TFL4 600 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 CMIPQ8IY22 773 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 POMGNT2Q8NAT1 580 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 OR4A15Q8NGL6 344 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 RAB8BQ92930 207 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 DDIT4LQ96D03 193 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 FBXO17Q96EF6 278 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 SORCS2Q96PQ0 1159 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 PIMREGQ9BSJ6 248 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 SF3B5Q9BWJ5 86 aaKnown RBP10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 PIF1Q9H611 641 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 CHODLQ9H9P2 273 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC17A7Q9P2U7 560 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 OSGIN1Q9UJX0 560 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 MOKQ9UQ07 419 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 TMED7Q9Y3B3 224 aa10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.76
CARMIL3-204ENST00000561354 TMEM72A0PK05 275 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 PRAMEF27A3QJZ7 478 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 CLDN24A6NM45 220 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 HAX1O00165 279 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 FAAHO00519 579 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 DCTN3O75935 186 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 PDE5AO76074 875 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 APEHP13798 732 aaKnown RBP10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 HNF1AP20823 631 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 TACR3P29371 465 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 SERPINF1P36955 418 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC1A3P43003 542 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 KHKP50053 298 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 SNRPD2P62316 118 aaKnown RBP10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 SQLEQ14534 574 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 ANXA8L1Q5VT79 327 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 LIPNQ5VXI9 398 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 TNFAIP8L2Q6P589 184 aaPredicted RBP10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 TRPM8Q7Z2W7 1104 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 ABHD12BQ7Z5M8 362 aaPredicted RBP10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 ZIC4Q8N9L1 334 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF540Q8NDQ6 660 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 VPS37AQ8NEZ2 397 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 CNOT9Q92600 299 aaKnown RBP10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 NEURL3Q96EH8 262 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 C7orf26Q96N11 449 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 FOXN4Q96NZ1 517 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 SIKE1Q9BRV8 207 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 USH1CQ9Y6N9 552 aa10.32□□□□□ -0.76
CARMIL3-204ENST00000561354 IGHV4-61A0A0C4DH41 118 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 AGAP5A6NIR3 686 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 B9A039 149 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 AP3D1O14617 1153 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 CPSF4O95639 269 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 BPGMP07738 259 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF23P17027 643 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 HPCAP84074 193 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 EFNB3Q15768 340 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 GPAT3Q53EU6 434 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 OTUD3Q5T2D3 398 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 IL17RELQ6ZVW7 336 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 AAED1Q7RTV5 226 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 HMGN2P46Q86SG4 172 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 ANKRD46Q86W74 232 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 OR9K2Q8NGE7 335 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 TESCQ96BS2 214 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 TRNT1Q96Q11 434 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 KATNB1Q9BVA0 655 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 DPY30Q9C005 99 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 ADAM19Q9H013 955 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 CA10Q9NS85 328 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 TMEM45AQ9NWC5 275 aa10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 MARCOQ9UEW3 520 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 FBXO9Q9UK97 447 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-204ENST00000561354 IGHV1-18A0A0C4DH31 117 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 ZC3H12DA2A288 527 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 AQP7P3A6NL99 342 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 HMGN4O00479 90 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 TGFAP01135 160 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 CRYAAP02489 173 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 PGRP06401 933 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 GPIP06744 558 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 UQCRBP14927 111 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 TXNL4AP83876 142 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 SRSF2Q01130 221 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 GSTA3Q16772 222 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 DPY19L1Q2PZI1 675 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 C3orf36Q3SXR2 165 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 TBRG1Q3YBR2 411 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms