RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 GIMAP1Q8WWP7 306 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 ARPC1AQ92747 370 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 DTNBP1Q96EV8 351 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 TGM7Q96PF1 710 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 TPPP3Q9BW30 176 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 DEFB127Q9H1M4 99 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 DMAP1Q9NPF5 467 aaPredicted RBP2.57□□□□□ -2
PSMA4-221ENST00000560842 PIPOXQ9P0Z9 390 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 STOX2Q9P2F5 926 aaPredicted RBP2.57□□□□□ -2
PSMA4-221ENST00000560842 STAP1Q9ULZ2 295 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 RPH3ALQ9UNE2 315 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 PSG11Q9UQ72 335 aa2.57□□□□□ -2
PSMA4-221ENST00000560842 LRCOL1A6NCL2 159 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 KRT13P13646 458 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 OTX2P32243 289 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 CHI3L1P36222 383 aaPredicted RBP2.56□□□□□ -2
PSMA4-221ENST00000560842 CCR6P51684 374 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 MADCAM1Q13477 382 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 EIF4EBP1Q13541 118 aaPredicted RBP2.56□□□□□ -2
PSMA4-221ENST00000560842 SLC15A2Q16348 729 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 BOLA3Q53S33 107 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 HSP90AA5PQ58FG0 334 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 ZNF683Q8IZ20 524 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 ANKFN1Q8N957 763 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 DUSP18Q8NEJ0 188 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 OR10G9Q8NGN4 311 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 TMEM246Q9BRR3 403 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 RAB34Q9BZG1 259 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 POLDIP2Q9Y2S7 368 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 ATP10AO60312 1499 aa2.56□□□□□ -2
PSMA4-221ENST00000560842 LOC110117498-PIK3R3F6TDL0 507 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 LAD1O00515 517 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 XPO1O14980 1071 aaKnown RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 UGT1A9O60656 530 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 TNFSF13O75888 250 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 KIAA0754O94854 1291 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 CMA1P23946 247 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 LAP3P28838 519 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 VDAC2P45880 294 aaPredicted RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 CBX1P83916 185 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 GANABQ14697 944 aaKnown RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 ATP6AP1Q15904 470 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 MICBQ29980 383 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 USH1GQ495M9 461 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 NADK2Q4G0N4 442 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 CARD16Q5EG05 197 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 PIGGQ5H8A4 983 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 TTC23Q5W5X9 447 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 FRMPD2BQ6IN97 320 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 ZFP2Q6ZN57 461 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 ZNF621Q6ZSS3 439 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 CAMK2N1Q7Z7J9 78 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 ZSCAN30Q86W11 494 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 TPRX1Q8N7U7 411 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 OR9G1Q8NH87 305 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 RAB7BQ96AH8 199 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 ITCHQ96J02 903 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 SENP8Q96LD8 212 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 C16orf45Q96MC5 204 aaPredicted RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 ROGDIQ9GZN7 287 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 VCXQ9H320 206 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 ZNFX1Q9P2E3 1918 aaKnown RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 ZNF223Q9UK11 482 aaPredicted RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 TBX21Q9UL17 535 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 COPS3Q9UNS2 423 aa2.55□□□□□ -2
PSMA4-221ENST00000560842 RPL36Q9Y3U8 105 aaKnown RBP2.55□□□□□ -2
PSMA4-221ENST00000560842 PDS5BQ9NTI5 1447 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 TMX2-CTNND1H3BSU7 103 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 MBTPS2O43462 519 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 PRKAB2O43741 272 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 AP2A1O95782 977 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 SLC25A27O95847 323 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 IQCF3P0C7M6 154 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 HNRNPA2B1P22626 353 aaKnown RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 HOXA9P31269 272 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 SOX6P35712 828 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 CRYBB1P53674 252 aaPredicted RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 KRTAP10-10P60014 251 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 PSG5Q15238 335 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 PDK4Q16654 411 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 CCDC92Q53HC0 331 aaPredicted RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 CES3Q6UWW8 571 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 ZNF571Q7Z3V5 609 aaPredicted RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 PAQR7Q86WK9 346 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 ZNF596Q8TC21 504 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 CTNNBL1Q8WYA6 563 aaPredicted RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 TMEM158Q8WZ71 300 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 FGF11Q92914 225 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 EMG1Q92979 244 aaKnown RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 MRPL45Q9BRJ2 306 aaKnown RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 PELOQ9BRX2 385 aaKnown RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 RIOK2Q9BVS4 552 aaKnown RBP2.54□□□□□ -2
PSMA4-221ENST00000560842 SCRT1Q9BWW7 348 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 GPR61Q9BZJ8 451 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 TPK1Q9H3S4 243 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 LRRN3Q9H3W5 708 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 RIBC2Q9H4K1 309 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 REEP4Q9H6H4 257 aa2.54□□□□□ -2
PSMA4-221ENST00000560842 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms