RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 PSMA8Q8TAA3 256 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 DCAKDQ8WVC6 231 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 PAFAH2Q99487 392 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 MS4A5Q9H3V2 200 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 SERHL2Q9H4I8 314 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 ZNF665Q9H7R5 613 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 C1orf109Q9NX04 203 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 NINJ2Q9NZG7 142 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 OPN4Q9UHM6 478 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 ZDHHC2Q9UIJ5 367 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 MKLN1Q9UL63 735 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 FAF1Q9UNN5 650 aaPredicted RBP7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 UTP11Q9Y3A2 253 aaKnown RBP7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 CMAHPQ9Y471 501 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 CORINQ9Y5Q5 1042 aa7.67□□□□□ -1.18
RABGGTA-217ENST00000560521 NBEAL2Q6ZNJ1 2754 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 TMED7-TICAM2A0A0A6YYA0 188 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 ZC3H12DA2A288 527 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 ZNF587BE7ETH6 402 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 J3QLI3 93 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 M0R233 179 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 ZSCAN12O43309 604 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 UPK3AO75631 287 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 RP2O75695 350 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 KRT33AO76009 404 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 NCR1O76036 304 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 AKR7A3O95154 331 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 GSNP06396 782 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 LAMP1P11279 417 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 HOXB1P14653 301 aaPredicted RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 NR4A1P22736 598 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 PHBP35232 272 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 ALDH3B1P43353 468 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 IL13RA1P78552 427 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 PLAURQ03405 335 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 SRSF4Q08170 494 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 C2orf54Q08AI8 447 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 SNTB2Q13425 540 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 OTUD3Q5T2D3 398 aaPredicted RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 AP1ARQ63HQ0 302 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 EIF3MQ7L2H7 374 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 LRP11Q86VZ4 500 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 SPATA4Q8NEY3 305 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 OR7A2PQ8NGA2 310 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 OR56A1Q8NGH5 318 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 OR2T11Q8NH01 316 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 MTERF3Q96E29 417 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 ZNF317Q96PQ6 595 aaPredicted RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 ALKBH3Q96Q83 286 aaPredicted RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 CCT7Q99832 543 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 PKP2Q99959 881 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 SF3B5Q9BWJ5 86 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 C7orf69Q9H7B7 122 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 NOX3Q9HBY0 568 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 MYEF2Q9P2K5 600 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 PCDHGB4Q9UN71 923 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 TMED7Q9Y3B3 224 aa7.66□□□□□ -1.18
RABGGTA-217ENST00000560521 DNAJC9-AS1A6NH13 148 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 POC1B-GALNT4F8VUJ3 575 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 PIP5K1BO14986 540 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ZNF208O43345 1280 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 STX11O75558 287 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 C6orf47O95873 294 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 KRT16P08779 473 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 MDKP21741 143 aaPredicted RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 MATN1P21941 496 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 GCH1P30793 250 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ARR3P36575 388 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 IDH2P48735 452 aaKnown RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 P2RY4P51582 365 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 RPS26P62854 115 aaKnown RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 MRPS11P82912 194 aaKnown RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 NPRL3Q12980 569 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 MAD2L1BPQ15013 274 aaPredicted RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ARHGAP11BQ3KRB8 267 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 AVPI1Q5T686 147 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 DCAF12L2Q5VW00 463 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 CLEC6AQ6EIG7 209 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 EMBQ6PCB8 327 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 DOK3Q7L591 496 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 GPAT4Q86UL3 456 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 CCNYL1Q8N7R7 359 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 SYT14Q8NB59 555 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 OR5AK3PQ8NH89 298 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 DDIT4LQ96D03 193 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ZG16BQ96DA0 208 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ZNF48Q96MX3 618 aaPredicted RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 NAPGQ99747 312 aaPredicted RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 SYT3Q9BQG1 590 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 PIF1Q9H611 641 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 CRLF2Q9HC73 371 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ZDHHC18Q9NUE0 388 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 PDP1Q9P0J1 537 aaPredicted RBP7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ATP6V1HQ9UI12 483 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 ZNF180Q9UJW8 692 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 OSGIN1Q9UJX0 560 aa7.65□□□□□ -1.18
RABGGTA-217ENST00000560521 LIPT2A6NK58 231 aa7.64□□□□□ -1.19
RABGGTA-217ENST00000560521 AQP7P3A6NL99 342 aa7.64□□□□□ -1.19
RABGGTA-217ENST00000560521 CLDN24A6NM45 220 aa7.64□□□□□ -1.19
RABGGTA-217ENST00000560521 G3V2L1 256 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms