RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 OR4K5Q8NGD3 323 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 SLC7A13Q8TCU3 470 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 GPR119Q8TDV5 335 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 RNF138Q8WVD3 245 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 HIST1H2ACQ93077 130 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 MRGPRX4Q96LA9 322 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 FEVQ99581 238 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 PRR14Q9BWN1 585 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 GABARAPL1Q9H0R8 117 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 ZFP64Q9NPA5 681 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 PAPOLBQ9NRJ5 636 aaKnown RBP10.63□□□□□ -0.71
LDLR-212ENST00000560467 SMPD3Q9NY59 655 aaPredicted RBP10.63□□□□□ -0.71
LDLR-212ENST00000560467 USE1Q9NZ43 259 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 LIPGQ9Y5X9 500 aa10.63□□□□□ -0.71
LDLR-212ENST00000560467 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
LDLR-212ENST00000560467 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 TRBV4-1A0A0J9YWV2 114 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 SNPHO15079 494 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 TRAPPC6AO75865 159 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 PRKACGP22612 351 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 DPP4P27487 766 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 HTR2AP28223 471 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 ADH6P28332 368 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 TACR3P29371 465 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 GAS1P54826 345 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 DLX5P56178 289 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 PPIAP62937 165 aaKnown RBP10.62□□□□□ -0.71
LDLR-212ENST00000560467 PPP1R8Q12972 351 aaKnown RBP10.62□□□□□ -0.71
LDLR-212ENST00000560467 SNTB1Q13884 538 aaKnown RBP10.62□□□□□ -0.71
LDLR-212ENST00000560467 GXYLT1Q4G148 440 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 TTC23Q5W5X9 447 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 BICRALQ6AI39 1079 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 TSEN54Q7Z6J9 526 aaKnown RBP10.62□□□□□ -0.71
LDLR-212ENST00000560467 TGIF2LYQ8IUE0 185 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 DHRSXQ8N5I4 330 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 OR2M3Q8NG83 312 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 OR4C15Q8NGM1 316 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 NRG4Q8WWG1 115 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 DDIT4LQ96D03 193 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 C1GALT1C1Q96EU7 318 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 FOXC2Q99958 501 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 PSD2Q9BQI7 771 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 WFDC6Q9BQY6 131 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 CXXC4Q9H2H0 198 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 LIME1Q9H400 295 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 ZDHHC11Q9H8X9 412 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 FAM215AQ9Y5M1 114 aa10.62□□□□□ -0.71
LDLR-212ENST00000560467 A0A087WUJ7 227 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 A0A087WUU8 490 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 TMED7-TICAM2A0A0A6YYA0 188 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GJE1A6NN92 205 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 A8MVM7 634 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 H3BN98 237 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 LINC01387J3KSC0 135 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 SOCS2O14508 198 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 OR2T1O43869 369 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 BCAS1O75363 584 aaPredicted RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 ALPLP05186 524 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GLI4P10075 376 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 SAGP10523 405 aaPredicted RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 TFPIP10646 304 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 IFI30P13284 250 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 ACADSP16219 412 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 HK1P19367 917 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 KLK2P20151 261 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 CCNA2P20248 432 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 ACVR2AP27037 513 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GTF2E2P29084 291 aaKnown RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 LIMS1P48059 325 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 RPS6KA3P51812 740 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GLYR1Q49A26 553 aaPredicted RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 RTL6Q6ICC9 239 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 RPL13AP3Q6NVV1 102 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 ZNF585AQ6P3V2 769 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 POMZP3Q6PJE2 187 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 SLC22A16Q86VW1 577 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 LIX1LQ8IVB5 337 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 NRMQ8IXM6 262 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 OR2M7Q8NG81 312 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 OR14L1PQ8NHC6 308 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 SLC25A43Q8WUT9 341 aaPredicted RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 CYGBQ8WWM9 190 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GTPBP3Q969Y2 492 aaKnown RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 BPIFA2Q96DR5 249 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GNRHR2Q96P88 292 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 TMEM43Q9BTV4 400 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 RSPO3Q9BXY4 272 aaPredicted RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 TTTY12Q9BZ98 90 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 PRRG3Q9BZD7 231 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 ADAM19Q9H013 955 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 GSX1Q9H4S2 264 aaPredicted RBP10.61□□□□□ -0.71
LDLR-212ENST00000560467 SMURF2Q9HAU4 748 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 MED17Q9NVC6 651 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 VDAC3Q9Y277 283 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 TMED7Q9Y3B3 224 aa10.61□□□□□ -0.71
LDLR-212ENST00000560467 DNAJC13O75165 2243 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 ZNF407Q9C0G0 2248 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 A0A0G2JNJ9 132 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms