RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ISPDA4D126 451 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 E5RI56 91 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 RNASEK-C17orf49H0YIS7 233 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 H3BMM5 538 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 GMFGO60234 142 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 GUCY1B2O75343 617 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 URI1O94763 535 aaPredicted RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 TPM2P07951 284 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 CCDC172P0C7W6 258 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 RBMY1A1P0DJD3 496 aaKnown RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 NT5EP21589 574 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 GCSHP23434 173 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 SLC6A2P23975 617 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 PPIFP30405 207 aaKnown RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 ANP32AP39687 249 aaKnown RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 IER3P46695 156 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 TAS2R40P59535 323 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 DGCR2P98153 550 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 NAAAQ02083 359 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 TGM3Q08188 693 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 HEPACAMQ14CZ8 416 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 ASTE1Q2TB18 679 aaPredicted RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 ADPRMQ3LIE5 342 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 TTLL9Q3SXZ7 439 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 GALNTL6Q49A17 601 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 RBM43Q6ZSC3 357 aaKnown RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 VSIG1Q86XK7 387 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 TTLQ8NG68 377 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 RNF138Q8WVD3 245 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 TMBIM1Q969X1 311 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 KLHL15Q96M94 604 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 PPP1R2P1Q96PQ5 205 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 FUZQ9BT04 418 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 ITPAQ9BY32 194 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 SRXN1Q9BYN0 137 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 ROGDIQ9GZN7 287 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 DPAGT1Q9H3H5 408 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 ZNF385DQ9H6B1 395 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 PELI2Q9HAT8 420 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 GCM1Q9NP62 436 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 SDHAF3Q9NRP4 125 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 GLS2Q9UI32 602 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 VDAC3Q9Y277 283 aa5.34□□□□□ -1.55
HERC1-208ENST00000560462 SRRM2Q9UQ35 2752 aaKnown RBP5.34□□□□□ -1.55
HERC1-208ENST00000560462 KMT2AQ03164 3969 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 A0A1W2PRX2 142 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 ANKRD61A6NGH8 418 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 TRIM49D1C9J1S8 452 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 H0YHG0 523 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 STX16-NPEPL1H3BU86 382 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 STX16O14662 325 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 PTP4A3O75365 173 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 GPR75O95800 540 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 SLC35E2BP0CK96 405 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 MPC1LP0DKB6 136 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CD28P10747 220 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 GZMAP12544 262 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CD22P20273 847 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 IL12BP29460 328 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CALCRP30988 508 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 KRT20P35900 424 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 PGM1P36871 562 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 ALDH3B1P43353 468 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 EVX1P49640 407 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 ZNF134P52741 427 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 PRKAG1P54619 331 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 FOXG1P55316 489 aaPredicted RBP5.33□□□□□ -1.56
HERC1-208ENST00000560462 TIAL1Q01085 375 aaKnown RBP eCLIP5.33□□□□□ -1.56
HERC1-208ENST00000560462 MYL5Q02045 173 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 IFT88Q13099 833 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CUL1Q13616 776 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 STX1AQ16623 288 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 RNF151Q2KHN1 245 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 MMEL1Q495T6 779 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 C9orf135Q5VTT2 229 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CLEC6AQ6EIG7 209 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 SFRP4Q6FHJ7 346 aaPredicted RBP5.33□□□□□ -1.56
HERC1-208ENST00000560462 TMPRSS11BQ86T26 416 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CCDC50Q8IVM0 306 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 ACOT4Q8N9L9 421 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 BHLHE22Q8NFJ8 381 aaPredicted RBP5.33□□□□□ -1.56
HERC1-208ENST00000560462 NEK11Q8NG66 645 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 OR7G1Q8NGA0 311 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 OR8K1Q8NGG5 319 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 APH1AQ96BI3 265 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 QKIQ96PU8 341 aaKnown RBP eCLIP5.33□□□□□ -1.565e-11■■■□□ 17.6
HERC1-208ENST00000560462 ZNF300Q96RE9 604 aaPredicted RBP5.33□□□□□ -1.56
HERC1-208ENST00000560462 NDNQ99608 321 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 SYT11Q9BT88 431 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CENPOQ9BU64 300 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 HEMGNQ9BXL5 484 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 PPANQ9NQ55 473 aaKnown RBP5.33□□□□□ -1.56
HERC1-208ENST00000560462 MS4A12Q9NXJ0 267 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 FAM53CQ9NYF3 392 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 MRPL15Q9P015 296 aaKnown RBP5.33□□□□□ -1.56
HERC1-208ENST00000560462 MALT1Q9UDY8 824 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 OR5V1Q9UGF6 321 aa5.33□□□□□ -1.56
HERC1-208ENST00000560462 CFL2Q9Y281 166 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms