RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CBLL1Q75N03 491 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 TPRA1Q86W33 373 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 IP6K3Q96PC2 410 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 SDHAF2Q9NX18 166 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 GHRLQ9UBU3 117 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 V9GY05 133 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ALDOCP09972 364 aaKnown RBP12.5□□□□□ -0.41
TRAF3-208ENST00000560371 RUNX2Q13950 521 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 GPR176Q14439 515 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 SIRT6Q8N6T7 355 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 KHSRPQ92945 711 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■□□□ 13.6
TRAF3-208ENST00000560371 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 FAIMQ9NVQ4 179 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF225Q9UK10 706 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 EXOSC6Q5RKV6 272 aaKnown RBP12.5□□□□□ -0.41
TRAF3-208ENST00000560371 LKAAEAR1Q8TD35 194 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ATG4BQ9Y4P1 393 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 DOCK7Q96N67 2140 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 S100PP25815 95 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 AFMIDQ63HM1 303 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 LHX8Q68G74 356 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 SERPINA12Q8IW75 414 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ADGRG5Q8IZF4 528 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 OR6F1Q8NGZ6 308 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 INPP5EQ9NRR6 644 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 CAV2P51636 162 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
TRAF3-208ENST00000560371 LHPPQ9H008 270 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 hCG_1809904A0A1W2PP81 198 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 A0A1W2PR64 198 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 A0A1W2PRV1 198 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 PRRG2O14669 202 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 NPPBP16860 134 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 KCNAB1Q14722 419 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 PYCR3Q53H96 274 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 OR56B2PQ8NGI1 322 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF705EA8MWA4 302 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 TARM1B6A8C7 271 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 EDIL3O43854 480 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 TK1P04183 234 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 CAPNS1P04632 268 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 TSFMP43897 325 aaKnown RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 STEAP2Q8NFT2 490 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR7C1O76099 320 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OPRD1P41143 372 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 MTCP1P56278 107 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 RPP30P78346 268 aaKnown RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 LRIT2A6NDA9 550 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 BIDP55957 195 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 SPOCK1Q08629 439 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 BPHLQ86WA6 291 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR7G1Q8NGA0 311 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 RLIMQ9NVW2 624 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR6C6A6NF89 314 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 MT-CO2P00403 227 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 MPEG1Q2M385 716 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 SPEM1Q8N4L4 309 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 FBXO27Q8NI29 283 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 SORCS2Q96PQ0 1159 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 J3KTA2 159 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 PKLRP30613 574 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 ABHD17CQ6PCB6 329 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 GDPD1Q8N9F7 314 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR4F15Q8NGB8 312 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 ZC3HAV1LQ96H79 300 aaKnown RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 A0A0G2JMP0 313 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF593O00488 134 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-208ENST00000560371 TSPAN31Q12999 210 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 LINC01465Q8N7H1 131 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 L3MBTL4Q8NA19 623 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 OR4M2Q8NGB6 313 aa12.49□□□□□ -0.41
TRAF3-208ENST00000560371 A0A0U1RQK1 487 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 FUOMA2VDF0 154 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
TRAF3-208ENST00000560371 CXCL10P02778 98 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 TACR1P25103 407 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 BCL6P41182 706 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM163Q8TC26 289 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 NICN1Q9BSH3 213 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 NLKQ9UBE8 527 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 PI4KAP42356 2102 aa12.48□□□□□ -0.41
TRAF3-208ENST00000560371 FANCGO15287 622 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms