RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ACKR1Q16570 336 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 RABL3Q5HYI8 236 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 INTS11Q5TA45 600 aaKnown RBP7.24□□□□□ -1.25
SNX1-207ENST00000559401 SPNS3Q6ZMD2 512 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 C20orf204Q6ZNR8 217 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 AAED1Q7RTV5 226 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 PATL1Q86TB9 770 aaKnown RBP7.24□□□□□ -1.25
SNX1-207ENST00000559401 COMTD1Q86VU5 262 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 PTOV1Q86YD1 416 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 P3H2Q8IVL5 708 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 SLC30A8Q8IWU4 369 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 C10orf53Q8N6V4 93 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 PCYOX1LQ8NBM8 494 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 OR9K2Q8NGE7 335 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 OR10A6Q8NH74 314 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 VANGL1Q8TAA9 524 aaPredicted RBP7.24□□□□□ -1.25
SNX1-207ENST00000559401 STK35Q8TDR2 534 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 HSD17B8Q92506 261 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 SLC38A4Q969I6 547 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 MUCL1Q96DR8 90 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 KTI12Q96EK9 354 aaPredicted RBP7.24□□□□□ -1.25
SNX1-207ENST00000559401 SLC47A1Q96FL8 570 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 MCHR1Q99705 422 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 SH3GL1Q99961 368 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 USB1Q9BQ65 265 aaKnown RBP7.24□□□□□ -1.25
SNX1-207ENST00000559401 ECSITQ9BQ95 431 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 CCDC134Q9H6E4 229 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 ESRP2Q9H6T0 727 aaKnown RBP7.24□□□□□ -1.25
SNX1-207ENST00000559401 SAR1AQ9NR31 198 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 ASB6Q9NWX5 421 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 ARMCX1Q9P291 453 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 KLHL14Q9P2G3 628 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 PRDM4Q9UKN5 801 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 RNF115Q9Y4L5 304 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 GMEB1Q9Y692 573 aa7.24□□□□□ -1.25
SNX1-207ENST00000559401 F8P00451 2351 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 A0A1W2PR80 420 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 OR5H1A6NKK0 313 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 CPSF4LA6NMK7 179 aaKnown RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 OR2T1O43869 369 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 SMPD2O60906 423 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 MFN2O95140 757 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 VAMP5O95183 116 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 CNOT4O95628 575 aaKnown RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 PLAUP00749 431 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 PNMTP11086 282 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 NQO1P15559 274 aaKnown RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 CDH2P19022 906 aaPredicted RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 CD53P19397 219 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 COX5AP20674 150 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 HTR2AP28223 471 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 HOXC12P31275 282 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 PCGF2P35227 344 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 H3F3AP84243 136 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 OR1Q1Q15612 314 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 VMACQ2NL98 169 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 TSPO2Q5TGU0 170 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 NIPAL3Q6P499 406 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 ULK3Q6PHR2 472 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 C5orf46Q6UWT4 87 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 POU5F2Q8N7G0 328 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 ZNF433Q8N7K0 673 aaPredicted RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 LSMEM1Q8N8F7 131 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 OR52N5Q8NH56 324 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 MFSD8Q8NHS3 518 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 DNAJA4Q8WW22 397 aaPredicted RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 PIGTQ969N2 578 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 LRRC58Q96CX6 371 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 MBD6Q96DN6 1003 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 PERPQ96FX8 193 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 SF3B5Q9BWJ5 86 aaKnown RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 FAM107BQ9H098 131 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 KAT8Q9H7Z6 458 aaKnown RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 EVA1AQ9H8M9 152 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 SLC7A10Q9NS82 523 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 BEX4Q9NWD9 120 aaPredicted RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 GID8Q9NWU2 228 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 TAS2R16Q9NYV7 291 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 MALT1Q9UDY8 824 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 RASD1Q9Y272 281 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 DSCAMO60469 2012 aa7.23□□□□□ -1.25
SNX1-207ENST00000559401 RAI1Q7Z5J4 1906 aaPredicted RBP7.23□□□□□ -1.25
SNX1-207ENST00000559401 CSMD2Q7Z408 3487 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 TRAV36DV7A0A075B6V5 113 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 M0R082 166 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 HS3ST1O14792 307 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 AIM2O14862 343 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ATP8B1O43520 1251 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 NPIPB7O75200 414 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 CD99P14209 185 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ZNF43P17038 809 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 LOXP28300 417 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 GRPRP30550 384 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 NTF4P34130 210 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 ZNF83P51522 516 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 CDH12P55289 794 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 CLDN17P56750 224 aa7.22□□□□□ -1.25
SNX1-207ENST00000559401 PCBP3P57721 371 aaKnown RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 NKX6-1P78426 367 aaPredicted RBP7.22□□□□□ -1.25
SNX1-207ENST00000559401 TGFBR3Q03167 851 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms