RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ETV4P43268 484 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SLC1A6P48664 564 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 KHKP50053 298 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 RPL14P50914 215 aaKnown RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 ATP5J2P56134 94 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 CLDN8P56748 225 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 OCRLQ01968 901 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 RASGEF1BQ0VAM2 473 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 STX3Q13277 289 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 RNPS1Q15287 305 aaKnown RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 FAM174BQ3ZCQ3 159 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SPANXN4Q5MJ08 99 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 HHATQ5VTY9 493 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 ADAM5Q6NVV9 412 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 C3orf33Q6P1S2 294 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 BHLHA15Q7RTS1 189 aaPredicted RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 RIMKLAQ8IXN7 391 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 ZNF100Q8IYN0 542 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 NATD1Q8N6N6 113 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 STEAP2Q8NFT2 490 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 PNPT1Q8TCS8 783 aaKnown RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 CFHR4Q92496 578 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 NEUROG1Q92886 237 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 CAVIN3Q969G5 261 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 ARL8AQ96BM9 186 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 MARK4Q96L34 752 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 MRGPRX4Q96LA9 322 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SLC35A5Q9BS91 424 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 PARD6BQ9BYG5 372 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 C20orf27Q9GZN8 174 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 SERINC1Q9NRX5 453 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 PNPOQ9NVS9 261 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 MARCOQ9UEW3 520 aaPredicted RBP6.49□□□□□ -1.37
SPG11-213ENST00000558988 PRSS50Q9UI38 385 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 KCNE5Q9UJ90 142 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 RAP2CQ9Y3L5 183 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 WDR45Q9Y484 360 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 RNF115Q9Y4L5 304 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 USF3Q68DE3 2245 aa6.49□□□□□ -1.37
SPG11-213ENST00000558988 FREM1Q5H8C1 2179 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 A0A1W2PR80 420 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 DUXAA6NLW8 204 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 CLDN24A6NM45 220 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 NPIPB9F8W1W9 429 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 RNASET2O00584 256 aaKnown RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 HS3ST1O14792 307 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 SMAD9O15198 467 aaKnown RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 EIF4E2O60573 245 aaKnown RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 UGT2B17O75795 530 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 C1QCP02747 245 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 YES1P07947 543 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 LBPP18428 481 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 PGCP20142 388 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 PSMB1P20618 241 aaKnown RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 UQCRC2P22695 453 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 EDNRAP25101 427 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 CDKN1AP38936 164 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 DIO1P49895 249 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 SESN3P58005 492 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 RPS4XP62701 263 aaKnown RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 SKP2Q13309 424 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 VEZF1Q14119 521 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 TAB1Q15750 504 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 MAPK14Q16539 360 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 ARHGAP11BQ3KRB8 267 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 SYT14P1Q58G82 188 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 C9orf135Q5VTT2 229 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 NXNQ6DKJ4 435 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 WDR93Q6P2C0 686 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 EIF3MQ7L2H7 374 aaKnown RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 RNF130Q86XS8 419 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 MAPK1IP1LQ8NDC0 245 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 VPS37AQ8NEZ2 397 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 KBTBD8Q8NFY9 601 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 PSMA8Q8TAA3 256 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 TMEM234Q8WY98 164 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 ROPN1LQ96C74 230 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 SORT1Q99523 831 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 PIP5K1AQ99755 562 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 OR11A1Q9GZK7 315 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 LAT2Q9GZY6 243 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 CXorf56Q9H5V9 222 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 CTPS2Q9NRF8 586 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 KLHL9Q9P2J3 617 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 GPR52Q9Y2T5 361 aa6.48□□□□□ -1.37
SPG11-213ENST00000558988 HRNRQ86YZ3 2850 aaPredicted RBP6.48□□□□□ -1.37
SPG11-213ENST00000558988 FLNAP21333 2647 aaKnown RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 PRSS51A0A1B0GVH4 220 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 A0A1W2PP18 115 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 CIB4A0PJX0 185 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 CCT8L1PA6NM43 557 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 E9PBE3 544 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 TM9SF1O15321 606 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 BIRC5O15392 142 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 PRODHO43272 600 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 KIAA0513O60268 411 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 GCM2O75603 506 aaPredicted RBP6.47□□□□□ -1.37
SPG11-213ENST00000558988 RAD51DO75771 328 aa6.47□□□□□ -1.37
SPG11-213ENST00000558988 SOX30O94993 753 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms