RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 PAQR7Q86WK9 346 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 C12orf56Q8IXR9 622 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 LRRC43Q8N309 656 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 CATSPER1Q8NEC5 780 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 OR10G9Q8NGN4 311 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 OR2L8Q8NGY9 312 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 FANK1Q8TC84 345 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 RAET1EQ8TD07 263 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 ACER1Q8TDN7 264 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 FAM3CQ92520 227 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 SH3YL1Q96HL8 342 aaPredicted RBP2.02□□□□□ -2.09
VPS13C-207ENST00000558919 C7orf34Q96L11 122 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 RIT2Q99578 217 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 TMEM117Q9H0C3 514 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 DPH5Q9H2P9 285 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 POLE3Q9NRF9 147 aa2.02□□□□□ -2.09
VPS13C-207ENST00000558919 AK6Q9Y3D8 172 aaKnown RBP2.02□□□□□ -2.09
VPS13C-207ENST00000558919 A0A0G2JLM5 398 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 HIP1O00291 1037 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 TAPBPO15533 448 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 ADCY5O95622 1261 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 IGHG4P01861 327 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 PTMAP06454 111 aaKnown RBP2.01□□□□□ -2.09
VPS13C-207ENST00000558919 PTMSP20962 102 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 UQCRC2P22695 453 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 FMO3P31513 532 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 SLC26A3P40879 764 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 TDO2P48775 406 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 FAM83EQ2M2I3 478 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 SLC25A52Q3SY17 297 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 LINC00483Q53H64 154 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 C5orf47Q569G3 176 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 LRRC10Q5BKY1 277 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 IGFL1Q6UW32 110 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 FADS6Q8N9I5 356 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 STXBP6Q8NFX7 210 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 CCDC110Q8TBZ0 833 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 MCOLN3Q8TDD5 553 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 TUBGCP2Q9BSJ2 902 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 NAT9Q9BTE0 207 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 MEAF6Q9HAF1 191 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 ZNF226Q9NYT6 803 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 DEC1Q9P2X7 70 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 STAP1Q9ULZ2 295 aa2.01□□□□□ -2.09
VPS13C-207ENST00000558919 COL1A2P08123 1366 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 ATP8B3O60423 1300 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 SF3B1O75533 1304 aaKnown RBP eCLIP2□□□□□ -2.09
VPS13C-207ENST00000558919 RGSL1A5PLK6 1076 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 IDSB3KWA1 339 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 MAPK13O15264 365 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 UGT1A9O60656 530 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 NEBLO76041 1014 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 TSPY4P0CV99 314 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 TSPY10P0CW01 314 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 NPR2P20594 1047 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 CMA1P23946 247 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 EFNB2P52799 333 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 ENPEPQ07075 957 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 PJVKQ0ZLH3 352 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 TATDN3Q17R31 274 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 MICBQ29980 383 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 BCL7AQ4VC05 210 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 TP53I3Q53FA7 332 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 SAMD4BQ5PRF9 694 aaKnown RBP2□□□□□ -2.09
VPS13C-207ENST00000558919 PCP2Q8IVA1 136 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 ZNF695Q8IW36 515 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 CLEC4FQ8N1N0 589 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 OR10G2Q8NGC3 310 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 OR4K14Q8NGD5 310 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 FGF11Q92914 225 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 EXOSC8Q96B26 276 aaKnown RBP2□□□□□ -2.09
VPS13C-207ENST00000558919 ASB9Q96DX5 294 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 TM4SF19Q96DZ7 209 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 C4orf36Q96KX1 117 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 SPIN2AQ99865 258 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 SPIN2BQ9BPZ2 258 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 DEFB127Q9H1M4 99 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 CDC42EP4Q9H3Q1 356 aaKnown RBP2□□□□□ -2.09
VPS13C-207ENST00000558919 SIAEQ9HAT2 523 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 SLC17A5Q9NRA2 495 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 EPS15L1Q9UBC2 864 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 CLCF1Q9UBD9 225 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 COPS3Q9UNS2 423 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 AURKCQ9UQB9 309 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 SLC25A15Q9Y619 301 aa2□□□□□ -2.09
VPS13C-207ENST00000558919 IGLV11-55A0A075B6I3 123 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 MBTPS2O43462 519 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 CD5P06127 495 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 KLK3P07288 261 aaPredicted RBP1.99□□□□□ -2.09
VPS13C-207ENST00000558919 MRPL3P09001 348 aaKnown RBP1.99□□□□□ -2.09
VPS13C-207ENST00000558919 HPGDP15428 266 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 P2RY1P47900 373 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TNFRSF17Q02223 184 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 ASPHQ12797 758 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 GRB7Q14451 532 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 KIAA0087Q14695 138 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 LY6EQ16553 131 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 UBE2SQ16763 222 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 TMEM183BQ1AE95 376 aa1.99□□□□□ -2.09
VPS13C-207ENST00000558919 RFX4Q33E94 735 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms