RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 DMTNQ08495 405 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 LIN52Q52LA3 116 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 BEND6Q5SZJ8 279 aaPredicted RBP11.85□□□□□ -0.51
VPS18-203ENST00000558855 RNF220Q5VTB9 566 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 SLC22A25Q6T423 547 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 TUBA1AQ71U36 451 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 MYPOPQ86VE0 399 aaPredicted RBP11.85□□□□□ -0.51
VPS18-203ENST00000558855 EPHX4Q8IUS5 362 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 PEX5LQ8IYB4 626 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 KIRREL3Q8IZU9 778 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 KDM8Q8N371 416 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 ZNF525Q8N782 197 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 GLB1L3Q8NCI6 653 aaPredicted RBP11.85□□□□□ -0.51
VPS18-203ENST00000558855 NANOS1Q8WY41 292 aaKnown RBP11.85□□□□□ -0.51
VPS18-203ENST00000558855 TMEM45BQ96B21 275 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 ZBTB18Q99592 522 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 WFDC6Q9BQY6 131 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 GRIP2Q9C0E4 1043 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 IKZF5Q9H5V7 419 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 MANSC1Q9H8J5 431 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 SLCO1B3Q9NPD5 702 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 SLC52A3Q9NQ40 469 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 ADPRHL2Q9NX46 363 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 ZIM2Q9NZV7 527 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 DCTN4Q9UJW0 460 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 SLC9A8Q9Y2E8 581 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 PCDHB14Q9Y5E9 798 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 SVEP1Q4LDE5 3571 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 KLF11O14901 512 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 UPK3AO75631 287 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 IL6P05231 212 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 HTR2AP28223 471 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 PPP2R2BQ00005 443 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 MST1LQ2TV78 715 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 C6orf10Q5SRN2 563 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 TMEM108Q6UXF1 575 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 PMM1Q92871 262 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 HS6ST2Q96MM7 605 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
VPS18-203ENST00000558855 DHRS9Q9BPW9 319 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 NAA11Q9BSU3 229 aaPredicted RBP11.84□□□□□ -0.51
VPS18-203ENST00000558855 SPATA9Q9BWV2 254 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 CBLN4Q9NTU7 201 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
VPS18-203ENST00000558855 MXRA5Q9NR99 2828 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 IGKV1D-42A0A075B6H8 117 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 IGHV1-18A0A0C4DH31 117 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 NR5A2O00482 541 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 UBDO15205 165 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 TPST1O60507 370 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 EIF1BO60739 113 aaKnown RBP11.83□□□□□ -0.52
VPS18-203ENST00000558855 ANP32DO95626 131 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 LGI1O95970 557 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 GPIP06744 558 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 BMP2P12643 396 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 CXCR1P25024 350 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 PTAFRP25105 342 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 FABP6P51161 128 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 CRISP3P54108 245 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 SLC18A1P54219 525 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
VPS18-203ENST00000558855 RGNQ15493 299 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 ETFDHQ16134 617 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 GSTA3Q16772 222 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 PAGE3Q5JUK9 113 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 C1orf140Q5VVS0 124 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 ATG16L1Q676U5 607 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 WBP2NLQ6ICG8 309 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 EPGNQ6UW88 154 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 CREB3L2Q70SY1 520 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 AAED1Q7RTV5 226 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 GPAT4Q86UL3 456 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 MUC15Q8N387 334 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 OR10H5Q8NGA6 315 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 ZNF837Q96EG3 531 aaPredicted RBP11.83□□□□□ -0.52
VPS18-203ENST00000558855 KTI12Q96EK9 354 aaPredicted RBP11.83□□□□□ -0.52
VPS18-203ENST00000558855 ITCHQ96J02 903 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 ALG2Q9H553 416 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 B3GAT1Q9P2W7 334 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 UPB1Q9UBR1 384 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 POU2F3Q9UKI9 436 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 MOKQ9UQ07 419 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 ATP23Q9Y6H3 246 aa11.83□□□□□ -0.52
VPS18-203ENST00000558855 TRBV5-3A0A0A0MS03 114 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 FAM234BA2RU67 622 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 A8MVM7 634 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 CD5LO43866 347 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 PNMTP11086 282 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
VPS18-203ENST00000558855 MPGP29372 298 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 ANXA11P50995 505 aaKnown RBP11.82□□□□□ -0.52
VPS18-203ENST00000558855 NUDT6P53370 316 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 LRRC74AQ0VAA2 488 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 TBRG1Q3YBR2 411 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 AGAP6Q5VW22 663 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 OR7E24Q6IFN5 339 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms