RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TRMOQ9BU70 441 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 DOHHQ9BU89 302 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 UGT2B28Q9BY64 529 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 EML4Q9HC35 981 aaKnown RBP3.81□□□□□ -1.8
SPG11-211ENST00000558561 SLC52A3Q9NQ40 469 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 MIEF1Q9NQG6 463 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 HAO1Q9UJM8 370 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 ACAD8Q9UKU7 415 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 STK38LQ9Y2H1 464 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 ZNF337Q9Y3M9 751 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 SNX8Q9Y5X2 465 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FBN2P35556 2912 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 DCHS2Q6V1P9 2916 aa3.81□□□□□ -1.8
SPG11-211ENST00000558561 FRG2CA6NGY1 282 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 OR6C70A6NIJ9 312 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TMEM114B3SHH9 223 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PRSS44E7EML9 344 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 H0Y3Z8 333 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 H3BQF6 201 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TM9SF1O15321 606 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 CFLARO15519 480 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 EMC8O43402 210 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ZWINTO95229 277 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TGM6O95932 706 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PLAUP00749 431 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 HPNP05981 417 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 OR12D1P0DN82 309 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 NAGAP17050 411 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 LBPP18428 481 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 GDF1P27539 372 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 HTR1EP28566 365 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TACR3P29371 465 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 GRK5P34947 590 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PNLIPRP2P54317 469 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 CLDN20P56880 219 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 MRPS22P82650 360 aaKnown RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 FUT5Q11128 374 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ZNF155Q12901 538 aaPredicted RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 TOMM20Q15388 145 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ATP6AP1LQ52LC2 224 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PAGE3Q5JUK9 113 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ZNF626Q68DY1 528 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 CGB2Q6NT52 195 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 MFSD12Q6NUT3 480 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TNFAIP8L2Q6P589 184 aaPredicted RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 EPGNQ6UW88 154 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 RNF165Q6ZSG1 346 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 SZRD1Q7Z422 152 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TAGAPQ8N103 731 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 C9orf106Q8NAJ2 232 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 POGLUT1Q8NBL1 392 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 OR10Q1Q8NGQ4 319 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 OR1J4Q8NGS1 313 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 NEIL3Q8TAT5 605 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PNPT1Q8TCS8 783 aaKnown RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 GPR151Q8TDV0 419 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 OR5P2Q8WZ92 322 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ABTB1Q969K4 478 aaPredicted RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 VPS33AQ96AX1 596 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 AURKBQ96GD4 344 aaPredicted RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 SH3YL1Q96HL8 342 aaPredicted RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 ART5Q96L15 291 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PPP3R2Q96LZ3 170 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 OR7D2Q96RA2 312 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 SDF2Q99470 211 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 CCT7Q99832 543 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TUBA1CQ9BQE3 449 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 WFDC6Q9BQY6 131 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PELOQ9BRX2 385 aaKnown RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 MYLK2Q9H1R3 596 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 LIME1Q9H400 295 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 EXO5Q9H790 373 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 METTL7AQ9H8H3 244 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 MEAF6Q9HAF1 191 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ACKR4Q9NPB9 350 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 LIN7CQ9NUP9 197 aaKnown RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 THAP1Q9NVV9 213 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 TAS2R9Q9NYW1 312 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 CNIH4Q9P003 139 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PRODH2Q9UF12 536 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 MKLN1Q9UL63 735 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 CAMK2AQ9UQM7 478 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 ENTPD4Q9Y227 616 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 C15orf41Q9Y2V0 281 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PCDHGB3Q9Y5G1 929 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 WIF1Q9Y5W5 379 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
SPG11-211ENST00000558561 CSMD1Q96PZ7 3565 aa3.8□□□□□ -1.8
SPG11-211ENST00000558561 C15orf38-AP3S2A0A0A6YYH1 394 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 A0A0J9YW62 118 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 A0A1B0GUH1 482 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SLC22A23A1A5C7 686 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 NPIPB9F8W1W9 429 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 TP53I11O14683 189 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 DIAPH2O60879 1101 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 CBR3O75828 277 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 BCAS2O75934 225 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms