RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 IL20RBQ6UXL0 311 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 WASH2PQ6VEQ5 465 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.1□□□□□ -1.592e-8■■□□□ 11.7
GABPB1-207ENST00000558335 Q6ZPB1 254 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 LAX1Q8IWV1 398 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 PDZD9Q8IXQ8 264 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 ARMC10Q8N2F6 343 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 SLC44A3Q8N4M1 653 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 FAM160A2Q8N612 972 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 ZNF283Q8N7M2 679 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 NAT16Q8N8M0 369 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 MRPL43Q8N983 215 aaKnown RBP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 MORN4Q8NDC4 146 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 SEMA6DQ8NFY4 1073 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 GPR32P1Q8NGA4 272 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 OR5J2Q8NH18 312 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 UBASH3BQ8TF42 649 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 MR1Q95460 341 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 GAL3ST3Q96A11 431 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 SCLYQ96I15 445 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 LINC00052Q96N35 136 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 FYTTD1Q96QD9 318 aaKnown RBP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 OR2M2Q96R28 347 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 F2RL3Q96RI0 385 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 CD180Q99467 661 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 RHNO1Q9BSD3 238 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 PCGF1Q9BSM1 259 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 YIPF4Q9BSR8 244 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 TMEM43Q9BTV4 400 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 DPH7Q9BTV6 452 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 KATNB1Q9BVA0 655 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 C1QTNF2Q9BXJ5 285 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 TEX101Q9BY14 249 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 MTIF3Q9H2K0 278 aaKnown RBP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 DPAGT1Q9H3H5 408 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 RNF122Q9H9V4 155 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 SIRT3Q9NTG7 399 aaPredicted RBP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 ZFP57Q9NU63 452 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 HAO2Q9NYQ3 351 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 AASSQ9UDR5 926 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 FBXW2Q9UKT8 454 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 ACSL6Q9UKU0 697 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 TBX21Q9UL17 535 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 CLEC4EQ9ULY5 219 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 SCML1Q9UN30 329 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 PUS1Q9Y606 427 aaKnown RBP eCLIP5.1□□□□□ -1.59
GABPB1-207ENST00000558335 BPTFQ12830 3046 aa5.1□□□□□ -1.59
GABPB1-207ENST00000558335 SCN5AQ14524 2016 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 TRAV1-2A0A0B4J238 106 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 CIB4A0PJX0 185 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 TMEM218A2RU14 115 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 TMEM202A6NGA9 273 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 UNC119BA6NIH7 251 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 HSPB2A8KAH6 182 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 INMT-MINDY4F8WBC2 141 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 BLOC1S5-TXNDC5H3BN57 136 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 M0R233 179 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SAP18O00422 153 aaKnown RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 CTDSPLO15194 276 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 CCL16O15467 120 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 RRP8O43159 456 aaKnown RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SMPD2O60906 423 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SOX14O95416 240 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 B3GALT4O96024 378 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SOD1P00441 154 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 F10P00742 488 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 TIMP1P01033 207 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 IFNA17P01571 189 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 HMGN2P05204 90 aaKnown RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SERPIND1P05546 499 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 IGFBP1P08833 259 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 CISD3P0C7P0 127 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 STAG3L3P0CL85 134 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 OR8G3PP0DMU2 310 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 ANXA3P12429 323 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 ARSBP15848 533 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 NDUFB7P17568 137 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 TNFRSF1BP20333 461 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 NPR2P20594 1047 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 ITGA3P26006 1051 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 STOMP27105 288 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 G0S2P27469 103 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 DDTP30046 118 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 S100A11P31949 105 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 HTR5AP47898 357 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 RFX2P48378 723 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SCAND1P57086 179 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 PRPS1P60891 318 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 RAP1AP62834 184 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 RPS21P63220 83 aaKnown RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 EIF5AP63241 154 aaKnown RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 CSNK1G2P78368 415 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 DCDP81605 110 aaKnown RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 CDK3Q00526 305 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 TLE2Q04725 743 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 DUSP8Q13202 625 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 SLAMF1Q13291 335 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 PIN1Q13526 163 aaPredicted RBP5.09□□□□□ -1.59
GABPB1-207ENST00000558335 GRIN2CQ14957 1233 aa5.09□□□□□ -1.59
GABPB1-207ENST00000558335 ZIC1Q15915 447 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms