RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PARPBPQ9NWS1 579 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 CISD1Q9NZ45 108 aaKnown RBP10.49□□□□□ -0.73
HERC1-202ENST00000558324 DSCAMO60469 2012 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 ACANP16112 2415 aa10.49□□□□□ -0.73
HERC1-202ENST00000558324 AQP7P3A6NL99 342 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 ELOA3DA6NLF2 546 aaPredicted RBP10.48□□□□□ -0.73
HERC1-202ENST00000558324 TMEM229AB2RXF0 380 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 M0R1B8 84 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 KRT33AO76009 404 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 AHSA1O95433 338 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 LY6G6DO95868 133 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 DANCRP0C864 163 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 ARAFP10398 606 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 PPIBP23284 216 aaKnown RBP10.48□□□□□ -0.73
HERC1-202ENST00000558324 RPS5P46782 204 aaKnown RBP10.48□□□□□ -0.73
HERC1-202ENST00000558324 CDK6Q00534 326 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 LGALS3BPQ08380 585 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 VEZF1Q14119 521 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 GABRA6Q16445 453 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 ZSWIM7Q19AV6 140 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 PGGHGQ32M88 737 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 ELOA3BQ3SY89 546 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 PRAMEF8Q5VWM4 474 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 PRAMEF7Q5VXH5 474 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 TMEM225Q6GV28 225 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 SLC22A25Q6T423 547 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 COMTD1Q86VU5 262 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 ELOA3Q8NG57 546 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 CKAP2Q8WWK9 683 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 SLC25A36Q96CQ1 311 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 MAGEB18Q96M61 343 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 PRR14Q9BWN1 585 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 NPHS2Q9NP85 383 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 SLC52A3Q9NQ40 469 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
HERC1-202ENST00000558324 RPS6KB2Q9UBS0 482 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 DCTN4Q9UJW0 460 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 POU2F3Q9UKI9 436 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 SLC25A15Q9Y619 301 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 NF1P21359 2839 aa10.48□□□□□ -0.73
HERC1-202ENST00000558324 MAP1AP78559 2803 aaPredicted RBP10.48□□□□□ -0.73
HERC1-202ENST00000558324 SETD2Q9BYW2 2564 aaPredicted RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 TRBV5-3A0A0A0MS03 114 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 PDLIM1O00151 329 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 TPST1O60507 370 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 HEXAP06865 529 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 ETS2P15036 469 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 PAX1P15863 534 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 HTR2AP28223 471 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 GTF2E2P29084 291 aaKnown RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 PRKAR1BP31321 381 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 ATP4BP51164 291 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 NCALDP61601 193 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 SLC25A3Q00325 362 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 SCARB2Q14108 478 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 GLIPR1L2Q4G1C9 344 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 OR7E24Q6IFN5 339 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 REEP3Q6NUK4 255 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 KLHL17Q6TDP4 642 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 TMEM108Q6UXF1 575 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 SSX8Q7RTT4 187 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 KRT73Q86Y46 540 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 KDM8Q8N371 416 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 ZIC4Q8N9L1 334 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 TMEM45BQ96B21 275 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 KTI12Q96EK9 354 aaPredicted RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 TRMT61AQ96FX7 289 aaKnown RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 MUS81Q96NY9 551 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 ALKBH3Q96Q83 286 aaPredicted RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 CPPED1Q9BRF8 314 aaPredicted RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 SF3B5Q9BWJ5 86 aaKnown RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 RSPO3Q9BXY4 272 aaPredicted RBP10.47□□□□□ -0.73
HERC1-202ENST00000558324 SLCO5A1Q9H2Y9 848 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 ALG2Q9H553 416 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 SEC14L4Q9UDX3 406 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 PRR14LQ5THK1 2151 aa10.47□□□□□ -0.73
HERC1-202ENST00000558324 A0A0G2JND7 137 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 A0A1B0GWA3 101 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 FAM171A2A8MVW0 826 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 EVPLLA8MZ36 301 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 ANGPT2O15123 496 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 TMCC2O75069 709 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 NPIPB7O75200 414 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 NDUFS7O75251 213 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 PNMTP11086 282 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 H2AFXP16104 143 aaPredicted RBP10.46□□□□□ -0.73
HERC1-202ENST00000558324 CBLP22681 906 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 SLC6A2P23975 617 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 PTAFRP25105 342 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 CD40P25942 277 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 MPGP29372 298 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 SELENOPP49908 381 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 P2RY4P51582 365 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 MTPNP58546 118 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 IL1RL1Q01638 556 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 TGFBR3Q03167 851 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 EGR4Q05215 589 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 CYP51A1Q16850 503 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms