RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SLC29A1Q99808 456 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 GABARAPL3Q9BY60 117 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 SMURF2Q9HAU4 748 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 MEPEQ9NQ76 525 aaPredicted RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 MRPL39Q9NYK5 338 aaKnown RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 IL20Q9NYY1 176 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 RAB26Q9ULW5 256 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 SLC6A5Q9Y345 797 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 CDH10Q9Y6N8 788 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 H3BN98 237 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 BCKDKO14874 412 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 KLF4O43474 513 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 MPZL2O60487 215 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 FZD7O75084 574 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 NDUFB2O95178 105 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 WISP1O95388 367 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 HMGN1P05114 100 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 HOXD4P09016 255 aaPredicted RBP11.17□□□□□ -0.62
TPM1-209ENST00000558072 POU2F1P14859 743 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 CPN1P15169 458 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 RPS5P46782 204 aaKnown RBP11.17□□□□□ -0.62
TPM1-209ENST00000558072 SMSP52788 366 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 CRISP1P54107 249 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 CARD18P57730 90 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 OR2B6P58173 313 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 NPRL3Q12980 569 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 MYBPHQ13203 477 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 PMS2P3Q13401 168 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 LAPTM4AQ15012 233 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 SGCBQ16585 318 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 VASNQ6EMK4 673 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 H1FNTQ75WM6 255 aaPredicted RBP11.17□□□□□ -0.62
TPM1-209ENST00000558072 HS3ST5Q8IZT8 346 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 DEPDC4Q8N2C3 294 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 ATP6V1C2Q8NEY4 427 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 OR2V1Q8NHB1 315 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 PFN4Q8NHR9 129 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 TAAR8Q969N4 342 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 ZNF524Q96C55 264 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 KTI12Q96EK9 354 aaPredicted RBP11.17□□□□□ -0.62
TPM1-209ENST00000558072 APOL4Q9BPW4 351 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 LHX6Q9UPM6 363 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 RASD1Q9Y272 281 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 HIF3AQ9Y2N7 669 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 HSPE1-MOB4S4R3N1 261 aa11.17□□□□□ -0.62
TPM1-209ENST00000558072 ACACBO00763 2458 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 LOC102725191A0A1B0GVB3 256 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 LIPT2A6NK58 231 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 SLC16A6O15403 523 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 ZNHIT1O43257 154 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 SYNGR4O95473 234 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 BGLAPP02818 100 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 ASAH2BP0C7U1 165 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 APEHP13798 732 aaKnown RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 SFTPDP35247 375 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 PTGER4P35408 488 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 CAPGP40121 348 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 GPR4P46093 362 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 DIO1P49895 249 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 TPD52P55327 224 aaPredicted RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 CDC42P60953 191 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 RBPJQ06330 500 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 ZP4Q12836 540 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 KEAP1Q14145 624 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 OR7A5Q15622 319 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 ZNF239Q16600 458 aaKnown RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 HBMQ6B0K9 141 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 SLC27A4Q6P1M0 643 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 PAQR6Q6TCH4 344 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 KLHL17Q6TDP4 642 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 DPY19L2P2Q6ZN68 376 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 ZNF620Q6ZNG0 422 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 OR2T33Q8NG76 320 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 FANK1Q8TC84 345 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 TRUB1Q8WWH5 349 aaKnown RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 RELTQ969Z4 430 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 SLC25A36Q96CQ1 311 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 SLC38A2Q96QD8 506 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 NPAS1Q99742 590 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 NIPSNAP1Q9BPW8 284 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 DEFB127Q9H1M4 99 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 TSPAN10Q9H1Z9 355 aaPredicted RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 RIBC2Q9H4K1 309 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 CHST11Q9NPF2 352 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 C20orf141Q9NUB4 165 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 TBC1D23Q9NUY8 699 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 TMEFF2Q9UIK5 374 aaPredicted RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 MCTS1Q9ULC4 181 aaKnown RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 SIGLEC7Q9Y286 467 aa11.16□□□□□ -0.62
TPM1-209ENST00000558072 MAGED1Q9Y5V3 778 aaPredicted RBP11.16□□□□□ -0.62
TPM1-209ENST00000558072 PKD1L2Q7Z442 2459 aa11.15□□□□□ -0.62
TPM1-209ENST00000558072 NPIPB13A6NJU9 1138 aa11.15□□□□□ -0.62
TPM1-209ENST00000558072 AHRRA9YTQ3 701 aa11.15□□□□□ -0.62
TPM1-209ENST00000558072 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
TPM1-209ENST00000558072 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
TPM1-209ENST00000558072 FTCDNL1E5RQL4 147 aa11.15□□□□□ -0.62
TPM1-209ENST00000558072 NPIPA5E9PKD4 350 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms