RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TMCC3Q9ULS5 477 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 AP4S1Q9Y587 144 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 A0A087WUU8 490 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 LRRN3E7EW58 273 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 TNFRSF11BO00300 401 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 DNPH1O43598 174 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 PIP5K1CO60331 668 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 EIF1BO60739 113 aaKnown RBP19.02■□□□□ 0.64
CASC4-204ENST00000557945 TIPRLO75663 272 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 KRT36O76013 467 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 AQP8O94778 261 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 AKR7A3O95154 331 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 FCGR2AP12318 317 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 IFI30P13284 250 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 AGFG1P52594 562 aaKnown RBP19.02■□□□□ 0.64
CASC4-204ENST00000557945 NUP107P57740 925 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 LSM11P83369 360 aaKnown RBP eCLIP19.02■□□□□ 0.64
CASC4-204ENST00000557945 LTBQ06643 244 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 ZNF771Q7L3S4 317 aaPredicted RBP19.02■□□□□ 0.64
CASC4-204ENST00000557945 FCRLAQ7L513 359 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 MCEMP1Q8IX19 187 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 NRMQ8IXM6 262 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 C10orf67Q8IYJ2 551 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 MARVELD2Q8N4S9 558 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 SGTBQ96EQ0 304 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 MOGAT1Q96PD6 335 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 DMRTA2Q96SC8 542 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 TM9SF2Q99805 663 aa19.02■□□□□ 0.64
CASC4-204ENST00000557945 MBD3L4A6NDZ8 208 aaPredicted RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 MBD3L3A6NE82 208 aaPredicted RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 MBD3L5A6NJ08 208 aaPredicted RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 FTCDNL1E5RQL4 147 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 SMAD9O15198 467 aaKnown RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 IL2RAP01589 272 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 BGLAPP02818 100 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 PER3P56645 1201 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 PPP1R8Q12972 351 aaKnown RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 MFSD13AQ14CX5 517 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 ZNF74Q16587 644 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 EXOC3L2Q2M3D2 409 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 OTUD3Q5T2D3 398 aaPredicted RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 MBOAT2Q6ZWT7 520 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 RNF113BQ8IZP6 322 aaKnown RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 TMEM99Q8N816 258 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 OR6S1Q8NH40 331 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 MBD3L2Q8NHZ7 208 aaPredicted RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 PYDC1Q8WXC3 89 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 DUS3LQ96G46 650 aaKnown RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 ASPNQ9BXN1 380 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 C20orf141Q9NUB4 165 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 SLC5A6Q9Y289 635 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 SAMHD1Q9Y3Z3 626 aaKnown RBP19.01■□□□□ 0.63
CASC4-204ENST00000557945 LYVE1Q9Y5Y7 322 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 U3KQV3 271 aa19.01■□□□□ 0.63
CASC4-204ENST00000557945 ENTPD5O75356 428 aa19■□□□□ 0.63
CASC4-204ENST00000557945 MT-ATP6P00846 226 aa19■□□□□ 0.63
CASC4-204ENST00000557945 GRPRP30550 384 aa19■□□□□ 0.63
CASC4-204ENST00000557945 TIMP3P35625 211 aa19■□□□□ 0.63
CASC4-204ENST00000557945 SEC23BQ15437 767 aa19■□□□□ 0.63
CASC4-204ENST00000557945 GTF2IRD2BQ6EKJ0 949 aa19■□□□□ 0.63
CASC4-204ENST00000557945 PAQR6Q6TCH4 344 aa19■□□□□ 0.63
CASC4-204ENST00000557945 MAMDC2Q7Z304 686 aaPredicted RBP19■□□□□ 0.63
CASC4-204ENST00000557945 GTF2IRD2Q86UP8 949 aa19■□□□□ 0.63
CASC4-204ENST00000557945 MEX3DQ86XN8 651 aaKnown RBP19■□□□□ 0.63
CASC4-204ENST00000557945 CCDC103Q8IW40 242 aa19■□□□□ 0.63
CASC4-204ENST00000557945 CDK20Q8IZL9 346 aa19■□□□□ 0.63
CASC4-204ENST00000557945 OR4K5Q8NGD3 323 aa19■□□□□ 0.63
CASC4-204ENST00000557945 ABHD3Q8WU67 409 aa19■□□□□ 0.63
CASC4-204ENST00000557945 RND1Q92730 232 aa19■□□□□ 0.63
CASC4-204ENST00000557945 BPIFA2Q96DR5 249 aa19■□□□□ 0.63
CASC4-204ENST00000557945 NANSQ9NR45 359 aa19■□□□□ 0.63
CASC4-204ENST00000557945 ARMC1Q9NVT9 282 aa19■□□□□ 0.63
CASC4-204ENST00000557945 VNN3Q9NY84 501 aa19■□□□□ 0.63
CASC4-204ENST00000557945 CORINQ9Y5Q5 1042 aa19■□□□□ 0.63
CASC4-204ENST00000557945 MYO7BQ6PIF6 2116 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 KIAA1549Q9HCM3 1950 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 SH3PXD2BA1X283 911 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 ZNF814B7Z6K7 855 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 M0R082 166 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 HNRNPRO43390 633 aaKnown RBP18.99■□□□□ 0.63
CASC4-204ENST00000557945 OR7A10O76100 309 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 TOXO94900 526 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 PLGP00747 810 aaPredicted RBP18.99■□□□□ 0.63
CASC4-204ENST00000557945 HIST1H2ABP04908 130 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 RIPPLY2Q5TAB7 128 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 OR2A2Q6IF42 318 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 MTFR2Q6P444 385 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 HIST3H2AQ7L7L0 130 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 GCNT2Q8N0V5 402 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 SLC43A2Q8N370 569 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 LRRC17Q8N6Y2 441 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 ZNF417Q8TAU3 575 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 PIGXQ8TBF5 258 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 RNF128Q8TEB7 428 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 HIST1H2ACQ93077 130 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 INTS12Q96CB8 462 aaKnown RBP18.99■□□□□ 0.63
CASC4-204ENST00000557945 ZNF587Q96SQ5 575 aaPredicted RBP18.99■□□□□ 0.63
CASC4-204ENST00000557945 FUZQ9BT04 418 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 FKRPQ9H9S5 495 aa18.99■□□□□ 0.63
CASC4-204ENST00000557945 RNF122Q9H9V4 155 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms