RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 BMP4P12644 408 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 ETFAP13804 333 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
TUBB3-213ENST00000557262 CRISP3P54108 245 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 LIN52Q52LA3 116 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 ATG16L1Q676U5 607 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 CLEC2AQ6UVW9 174 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 B3GLCTQ6Y288 498 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 ZNF836Q6ZNA1 936 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 CXXC5Q7LFL8 322 aaKnown RBP13.92□□□□□ -0.18
TUBB3-213ENST00000557262 HIPK1Q86Z02 1210 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 CADM2Q8N3J6 435 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 POMGNT2Q8NAT1 580 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 OR9K2Q8NGE7 335 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 SPATA3Q8NHX4 192 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 SLC38A5Q8WUX1 472 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 BOD1Q96IK1 185 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 ZNF385AQ96PM9 386 aaKnown RBP13.92□□□□□ -0.18
TUBB3-213ENST00000557262 TAPBPLQ9BX59 468 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 RMND5AQ9H871 391 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 TPT1P8Q9HAU6 139 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 THUMPD1Q9NXG2 353 aaKnown RBP13.92□□□□□ -0.18
TUBB3-213ENST00000557262 RTTNQ86VV8 2226 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 DSPPQ9NZW4 1301 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 IGHV4-30-2A0A087WSY4 118 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 A0A0G2JPF8 293 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 AQP7P3A6NL99 342 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 A8MVM7 634 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 HNRNPCL2B2RXH8 293 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 HNRNPCL3B7ZW38 293 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 H7C417 338 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 GPRIN2O60269 458 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 HNRNPCL1O60812 293 aaKnown RBP13.91□□□□□ -0.18
TUBB3-213ENST00000557262 WNT11O96014 354 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 BCHEP06276 602 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 HNRNPCL4P0DMR1 293 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 SLC18A1P54219 525 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 DSTNP60981 165 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 CHRNB3Q05901 458 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 BNIP2Q12982 314 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 LARS2Q15031 903 aaKnown RBP13.91□□□□□ -0.18
TUBB3-213ENST00000557262 ABHD12BQ7Z5M8 362 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-213ENST00000557262 LSRQ86X29 649 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-213ENST00000557262 CLIP4Q8N3C7 705 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 MGARPQ8TDB4 240 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-213ENST00000557262 ITCHQ96J02 903 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 MAELQ96JY0 434 aaKnown RBP13.91□□□□□ -0.18
TUBB3-213ENST00000557262 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 MANSC1Q9H8J5 431 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 PMF1-BGLAPU3KQ54 211 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 PLCE1Q9P212 2302 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 ATRQ13535 2644 aa13.91□□□□□ -0.18
TUBB3-213ENST00000557262 COL6A5A8TX70 2615 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 A0A096LNT2 108 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 TMEM247A6NEH6 219 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 ELOA3DA6NLF2 546 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 A8MV72 311 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 KRT33AO76009 404 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 VAMP5O95183 116 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 CDH2P19022 906 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 NCF2P19878 526 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 SLC25A3Q00325 362 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 ELOA3BQ3SY89 546 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 SLC9B1Q4ZJI4 515 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 RNF220Q5VTB9 566 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 HMBOX1Q6NT76 420 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 KLHL24Q6TFL4 600 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 MSANTD1Q6ZTZ1 278 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 GPAT4Q86UL3 456 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 ELOA3Q8NG57 546 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 HTRA1Q92743 480 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 TNFRSF13CQ96RJ3 184 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 SPATA9Q9BWV2 254 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 CACYBPQ9HB71 228 aaKnown RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 SDR39U1Q9NRG7 319 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 ADPRHL2Q9NX46 363 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 ZNF443Q9Y2A4 671 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 IFT52Q9Y366 437 aa13.9□□□□□ -0.18
TUBB3-213ENST00000557262 HEATR1Q9H583 2144 aaKnown RBP13.9□□□□□ -0.18
TUBB3-213ENST00000557262 A0A096LPI6 279 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 UBDO15205 165 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 IFNA2P01563 188 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 PRG2P13727 222 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 SLC25A16P16260 332 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 PAX7P23759 505 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 P2RY4P51582 365 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 POLR2JP52435 117 aaKnown RBP13.89□□□□□ -0.19
TUBB3-213ENST00000557262 EFNA4P52798 201 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 LOXL1Q08397 574 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-213ENST00000557262 C1orf140Q5VVS0 124 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 PODNL1Q6PEZ8 512 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 CREB3L2Q70SY1 520 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 STK35Q8TDR2 534 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 FAM168AQ92567 244 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 TMEM19Q96HH6 336 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 OBP2BQ9NPH6 170 aa13.89□□□□□ -0.19
TUBB3-213ENST00000557262 MOKQ9UQ07 419 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms