RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PEX11AO75192 247 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 CYP7B1O75881 506 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 C8BP07358 591 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 ITGA5P08648 1049 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 TFPIP10646 304 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 PDLIM4P50479 330 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 ZNF83P51522 516 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 CLDN8P56748 225 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 PHC1P78364 1004 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 SLC35A1P78382 337 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 TXNL4AP83876 142 aaKnown RBP7.58□□□□□ -1.2
VRK1-206ENST00000557222 EMX2Q04743 252 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 PTGR1Q14914 329 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 GPR68Q15743 365 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 ATAD3BQ5T9A4 648 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 IL23RQ5VWK5 629 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 TSPYL5Q86VY4 417 aaPredicted RBP7.58□□□□□ -1.2
VRK1-206ENST00000557222 CMIPQ8IY22 773 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 ZNF525Q8N782 197 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 WDR31Q8NA23 367 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 FNDC5Q8NAU1 212 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 ZNF540Q8NDQ6 660 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 OR8J2Q8NGG1 315 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 OR5D16Q8NGK9 328 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.58□□□□□ -1.2
VRK1-206ENST00000557222 NAA11Q9BSU3 229 aaPredicted RBP7.58□□□□□ -1.2
VRK1-206ENST00000557222 MOV10Q9HCE1 1003 aaKnown RBP7.58□□□□□ -1.2
VRK1-206ENST00000557222 OBP2BQ9NPH6 170 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 SLC17A5Q9NRA2 495 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.58□□□□□ -1.2
VRK1-206ENST00000557222 TMEM181Q9P2C4 612 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 KCNS2Q9ULS6 477 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 PCDHGB4Q9UN71 923 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 FKBP7Q9Y680 259 aa7.58□□□□□ -1.2
VRK1-206ENST00000557222 LOC390937A0A1W2PQ73 354 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 TMEM233B4DJY2 109 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 M0R1B8 84 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 FAAHO00519 579 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 SHBGP04278 402 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 CHRNGP07510 517 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 NUDT17P0C025 328 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 UBTFL6P0CB48 400 aaPredicted RBP7.57□□□□□ -1.2
VRK1-206ENST00000557222 SRD5A1P18405 259 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 HNF1AP20823 631 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 PTNP21246 168 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 UQCRC2P22695 453 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 MPGP29372 298 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 ALDH3A1P30838 453 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 NR4A2P43354 598 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 PRPS1P60891 318 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 KCNJ10P78508 379 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 CHRNEQ04844 493 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 SQLEQ14534 574 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 SLC17A1Q14916 467 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 KRTAP24-1Q3LI83 254 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 C3orf36Q3SXR2 165 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 FAM166AQ6J272 317 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 PAQR6Q6TCH4 344 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 B3GLCTQ6Y288 498 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 C16orf62Q7Z3J2 963 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 ABHD12BQ7Z5M8 362 aaPredicted RBP7.57□□□□□ -1.2
VRK1-206ENST00000557222 ADGRG3Q86Y34 549 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 RIBC1Q8N443 379 aaPredicted RBP7.57□□□□□ -1.2
VRK1-206ENST00000557222 ARFGAP2Q8N6H7 521 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 KRTCAP2Q8N6L1 136 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 POMGNT2Q8NAT1 580 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 VPS37AQ8NEZ2 397 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 OR5AK3PQ8NH89 298 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 ZNF563Q8TA94 476 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 TMEM45BQ96B21 275 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 DDIT4LQ96D03 193 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 APOPT1Q96IL0 206 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 ARL5BQ96KC2 179 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 SLC35G5Q96KT7 338 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 C3orf30Q96M34 536 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 ZNF317Q96PQ6 595 aaPredicted RBP7.57□□□□□ -1.2
VRK1-206ENST00000557222 PIMREGQ9BSJ6 248 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 SF3B5Q9BWJ5 86 aaKnown RBP7.57□□□□□ -1.2
VRK1-206ENST00000557222 C12orf65Q9H3J6 166 aaKnown RBP7.57□□□□□ -1.2
VRK1-206ENST00000557222 SERHL2Q9H4I8 314 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 CTPS2Q9NRF8 586 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 UPB1Q9UBR1 384 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 DUSP13Q9UII6 198 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 MKLN1Q9UL63 735 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 WDR45Q9Y484 360 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 FLVCR1Q9Y5Y0 555 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 ATP23Q9Y6H3 246 aa7.57□□□□□ -1.2
VRK1-206ENST00000557222 RNF103-CHMP3A0A140T963 221 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 PRSS51A0A1B0GVH4 220 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 OR6C65A6NJZ3 312 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 PDE5AO76074 875 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 SNUPNO95149 360 aaKnown RBP7.56□□□□□ -1.2
VRK1-206ENST00000557222 SLU7O95391 586 aaKnown RBP7.56□□□□□ -1.2
VRK1-206ENST00000557222 IGHV3-9P01782 118 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 G6PDP11413 515 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 SOAT1P35610 550 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 SLC1A3P43003 542 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 POLR2HP52434 150 aaKnown RBP7.56□□□□□ -1.2
VRK1-206ENST00000557222 OR2B6P58173 313 aa7.56□□□□□ -1.2
VRK1-206ENST00000557222 SPOCK1Q08629 439 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms