RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 PCLAFQ15004 111 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 WHAMMP3Q1A5X7 153 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 PGS1Q32NB8 556 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 XKR7Q5GH72 579 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 C6orf136Q5SQH8 315 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 OTUD3Q5T2D3 398 aaPredicted RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 TNFAIP8L2Q6P589 184 aaPredicted RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 PAQR6Q6TCH4 344 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 SPATA21Q7Z572 469 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 GPAT4Q86UL3 456 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 RIMKLAQ8IXN7 391 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 ARFGAP2Q8N6H7 521 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM99Q8N816 258 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 FNDC5Q8NAU1 212 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 OR1K1Q8NGR3 316 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 UBASH3BQ8TF42 649 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 WDR60Q8WVS4 1066 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 XAGE5Q8WWM1 108 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 CNOT9Q92600 299 aaKnown RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 GCDHQ92947 438 aaPredicted RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 DDIT4LQ96D03 193 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 SLC35G5Q96KT7 338 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 C3orf30Q96M34 536 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 ALKBH3Q96Q83 286 aaPredicted RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 DOK1Q99704 481 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 DYNLRB1Q9NP97 96 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 EXOSC3Q9NQT5 275 aaKnown RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 CRNNQ9UBG3 495 aaPredicted RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 OSGIN1Q9UJX0 560 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 ARPC4-TTLL3A0A0A6YYG9 625 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM129A0AVI4 362 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 B4DSR2 109 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF587BE7ETH6 402 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 COPEO14579 308 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 IGLV1-44P01699 117 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 IGFBP1P08833 259 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 CELA3BP08861 270 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 FAM153BP0C7A2 387 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 G6PDP11413 515 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 KRT4P19013 534 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 NPR2P20594 1047 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 SELENOPP49908 381 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 POLR2HP52434 150 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 IL1RL1Q01638 556 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 FUT5Q11128 374 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 CEACAM7Q14002 265 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 OR7A5Q15622 319 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ADRM1Q16186 407 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ATAD3BQ5T9A4 648 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 AP1ARQ63HQ0 302 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 OR4F3Q6IEY1 312 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 SHQ1Q6PI26 577 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 UGT2A3Q6UWM9 527 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 DEF8Q6ZN54 512 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 FRRS1Q6ZNA5 592 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 LINGO2Q7L985 606 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ABHD12BQ7Z5M8 362 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 MYPOPQ86VE0 399 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 GLCCI1Q86VQ1 547 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 CDK20Q8IZL9 346 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ANKK1Q8NFD2 765 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 NUP37Q8NFH4 326 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 OR4F15Q8NGB8 312 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 MIPOL1Q8TD10 442 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 OIT3Q8WWZ8 545 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 BCL2L2Q92843 193 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 PMM1Q92871 262 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 RNF166Q96A37 237 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ROPN1LQ96C74 230 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 SF3B5Q9BWJ5 86 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 SAP130Q9H0E3 1048 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 TPK1Q9H3S4 243 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 NARFLQ9H6Q4 476 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF442Q9H7R0 627 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 LPAR2Q9HBW0 351 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 POLE3Q9NRF9 147 aa7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 FBXO9Q9UK97 447 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM89A2RUT3 159 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 PRAMEF27A3QJZ7 478 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 AQP7P3A6NL99 342 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 SMIM23A6NLE4 172 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 FAM157AC9JC47 383 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 SCN2BO60939 215 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 UPK3AO75631 287 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 AGR2O95994 175 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 IGKV3-15P01624 115 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 GPIP06744 558 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 GUSBP08236 651 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 ADRA2AP08913 450 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 PAX7P23759 505 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 KHKP50053 298 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 MAP2K6P52564 334 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 HPCAP84074 193 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 C3orf36Q3SXR2 165 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 GPAT3Q53EU6 434 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM225Q6GV28 225 aa7.8□□□□□ -1.16
HNRNPC-227ENST00000556897 THSD4Q6ZMP0 1018 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms