RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ZC3H12DA2A288 527 aaKnown RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 FAM220BPB1ANY3 271 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 FXYD1O00168 92 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 GSTA4O15217 222 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 OR2T1O43869 369 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 SNX3O60493 162 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 TPST1O60507 370 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 MRPL33O75394 65 aaKnown RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 CTAG2O75638 210 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 KLK2P20151 261 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 IL1RL1Q01638 556 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 VEZF1Q14119 521 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 DAZAP2Q15038 168 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 SWT1Q5T5J6 900 aaKnown RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 TMEM225Q6GV28 225 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 GPAT4Q86UL3 456 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 VANGL1Q8TAA9 524 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 KISS1RQ969F8 398 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 SLC25A36Q96CQ1 311 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-207ENST00000556831 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 RASSF1Q9NS23 344 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 GPR52Q9Y2T5 361 aa12.52□□□□□ -0.41
SLIRP-207ENST00000556831 IGKV3D-15A0A087WSY6 115 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 ELOVL7A1L3X0 281 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 LIPT2A6NK58 231 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 TMEM229AB2RXF0 380 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 M0R3H8 397 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 FMO6PO60774 539 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 DCTN3O75935 186 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 VAMP5O95183 116 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 LGI1O95970 557 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 IMPDH2P12268 514 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-207ENST00000556831 CD247P20963 164 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 DRD4P21917 467 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 HTR2AP28223 471 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 RPS5P46782 204 aaKnown RBP12.51□□□□□ -0.41
SLIRP-207ENST00000556831 OR3A2P47893 321 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 P2RY6Q15077 328 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 OR1Q1Q15612 314 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 ANKRD34AQ69YU3 496 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 Q6ZT83 130 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-207ENST00000556831 CCDC103Q8IW40 242 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 WFIKKN1Q96NZ8 548 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 MCHR1Q99705 422 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
SLIRP-207ENST00000556831 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
SLIRP-207ENST00000556831 CCDC168Q8NDH2 2452 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 TRAV36DV7A0A075B6V5 113 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 ZNF716A6NP11 495 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 GMNNO75496 209 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 KRT33AO76009 404 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 AKR7A3O95154 331 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 CNOT4O95628 575 aaKnown RBP12.5□□□□□ -0.41
SLIRP-207ENST00000556831 ADAP00813 363 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
SLIRP-207ENST00000556831 PRDX6P30041 224 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 CCKARP32238 428 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 IFNA8P32881 189 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 SLC16A1P53985 500 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 ITGADQ13349 1161 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 MFSD13AQ14CX5 517 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 POU4F3Q15319 338 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 DUSP7Q16829 419 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 FAM69AQ5T7M9 428 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 ALKBH2Q6NS38 261 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 ZNF613Q6PF04 617 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 STAC2Q6ZMT1 411 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 CCDC80Q76M96 950 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 MICU2Q8IYU8 434 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 MFSD8Q8NHS3 518 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 TAMM41Q96BW9 452 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 ARHGDIGQ99819 225 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 SF3B5Q9BWJ5 86 aaKnown RBP12.5□□□□□ -0.41
SLIRP-207ENST00000556831 RSPO3Q9BXY4 272 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-207ENST00000556831 OR10A4Q9H209 315 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 NGBQ9NPG2 151 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 UPB1Q9UBR1 384 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 SH3GLB1Q9Y371 365 aa12.5□□□□□ -0.41
SLIRP-207ENST00000556831 A0A0B4J2E0 115 aa12.49□□□□□ -0.41
SLIRP-207ENST00000556831 A0A1B0GX12 115 aa12.49□□□□□ -0.41
SLIRP-207ENST00000556831 CCT8L1PA6NM43 557 aa12.49□□□□□ -0.41
SLIRP-207ENST00000556831 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
SLIRP-207ENST00000556831 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
SLIRP-207ENST00000556831 HOXC12P31275 282 aa12.49□□□□□ -0.41
SLIRP-207ENST00000556831 SLC7A2P52569 658 aa12.49□□□□□ -0.41
SLIRP-207ENST00000556831 H3F3AP84243 136 aa12.49□□□□□ -0.41
SLIRP-207ENST00000556831 C1DQ13901 141 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms