RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MEMO1Q9Y316 297 aa4.34□□□□□ -1.71
HIF1A-209ENST00000556827 CCL27Q9Y4X3 112 aa4.34□□□□□ -1.71
HIF1A-209ENST00000556827 KLK4Q9Y5K2 254 aa4.34□□□□□ -1.71
HIF1A-209ENST00000556827 UTP20O75691 2785 aaKnown RBP4.34□□□□□ -1.72
HIF1A-209ENST00000556827 IGKV3D-20A0A0C4DH25 116 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 A0A1W2PQ72 361 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 MEIOCA2RUB1 952 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 H0YIG0 161 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KLRC4-KLRK1H3BQV0 150 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 NDC80O14777 642 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KLF11O14901 512 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 ARPC2O15144 300 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 ZBTB14O43829 449 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 APRTP07741 180 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 ZNF24P17028 368 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 IL10P22301 178 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PSMA3P25788 255 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PSMB5P28074 263 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 ATP5DP30049 168 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 SLC26A3P40879 764 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 XCR1P46094 333 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 BDKRB1P46663 353 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 NPY2RP49146 381 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 CYB561P49447 251 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 RAD23AP54725 363 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 RPS15AP62244 130 aaKnown RBP4.33□□□□□ -1.72
HIF1A-209ENST00000556827 CSNK1G2P78368 415 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 SARNPP82979 210 aaKnown RBP4.33□□□□□ -1.72
HIF1A-209ENST00000556827 RELAQ04206 551 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PRDX1Q06830 199 aaKnown RBP4.33□□□□□ -1.72
HIF1A-209ENST00000556827 MZT1Q08AG7 82 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 NSDHLQ15738 373 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 SLC25A25Q6KCM7 469 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 NIPAL1Q6NVV3 410 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 TMEM205Q6UW68 189 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 Q6ZPB1 254 aaPredicted RBP4.33□□□□□ -1.72
HIF1A-209ENST00000556827 BTN2A1Q7KYR7 527 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KIAA1328Q86T90 577 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 LACC1Q8IV20 430 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 CLYBLQ8N0X4 340 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KRT222Q8N1A0 295 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KLHDC1Q8N7A1 406 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 AMER3Q8N944 861 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 GPATCH11Q8N954 259 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 OR13C3Q8NGS6 347 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 OR2T6Q8NHC8 308 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 M1APQ8TC57 530 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 AGAP11Q8TF27 550 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PHF10Q8WUB8 498 aaKnown RBP4.33□□□□□ -1.72
HIF1A-209ENST00000556827 IMMP1LQ96LU5 166 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 C10orf90Q96M02 699 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 ZNF559Q9BR84 538 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PRRG4Q9BZD6 226 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 TSGA10Q9BZW7 698 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 IL22Q9GZX6 179 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PCBD2Q9H0N5 130 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 KCNJ16Q9NPI9 418 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 PAK5Q9P286 719 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 STOX2Q9P2F5 926 aaPredicted RBP4.33□□□□□ -1.72
HIF1A-209ENST00000556827 TAC3Q9UHF0 121 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 ANGPTL3Q9Y5C1 460 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 CREBBPQ92793 2442 aa4.33□□□□□ -1.72
HIF1A-209ENST00000556827 USP9XQ93008 2570 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 GABRR3A8MPY1 467 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 CCL24O00175 119 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 PSMD12O00232 456 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 TFECO14948 347 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 KIF5CO60282 957 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 CDC40O60508 579 aaKnown RBP eCLIP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 VAPBO95292 243 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 NSA2O95478 260 aaKnown RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SLC35G6P0C7Q6 338 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SAGP10523 405 aaPredicted RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 CD99P14209 185 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 RPS3P23396 243 aaKnown RBP eCLIP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 BMXP51813 675 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 OR4D2P58180 307 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 HERV-K104P61576 105 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 ACVR1Q04771 509 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 FASTKQ14296 549 aaKnown RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 GRB7Q14451 532 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 ABRAXAS2Q15018 415 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 PHKG1Q16816 387 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 HKDC1Q2TB90 917 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SFT2D3Q587I9 215 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SLC35D3Q5M8T2 416 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SEL1L2Q5TEA6 688 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SPINK14Q6IE38 97 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 CASC4Q6P4E1 433 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 SUSD1Q6UWL2 747 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 C3P1Q6ZMU1 363 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 GALNTL5Q7Z4T8 443 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 ANKRD37Q7Z713 158 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 PAQR7Q86WK9 346 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 RPS19BP1Q86WX3 136 aaKnown RBP4.32□□□□□ -1.72
HIF1A-209ENST00000556827 KRTAP7-1Q8IUC3 87 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 FAM219AQ8IW50 185 aa4.32□□□□□ -1.72
HIF1A-209ENST00000556827 TMEM156Q8N614 296 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms