RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 SLC17A5Q9NRA2 495 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 IL36GQ9NZH8 169 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ZNF225Q9UK10 706 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ALG6Q9Y672 507 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 TTC21BQ7Z4L5 1316 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CTAGE15A4D2H0 777 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 ARHGEF35A5YM69 484 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 OR52A4PA6NMU1 304 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 SNTNA6NMZ2 147 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 NPIPA7E9PJI5 369 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 G3V4G9 280 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 SGK1O00141 431 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 TAPBPO15533 448 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 MED7O43513 233 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 KLHL41O60662 606 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 ALOX5P09917 674 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 UQCRFS1P1P0C7P4 283 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 NPIPA8P0DM63 369 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 PNMTP11086 282 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 MAGEA8P43361 318 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 AP3M2P53677 418 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 SEC61GP60059 68 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 RPL23AP62750 156 aaKnown RBP2.82□□□□□ -1.96
SCFD1-221ENST00000556534 NCBP1Q09161 790 aaKnown RBP2.82□□□□□ -1.96
SCFD1-221ENST00000556534 UNC119Q13432 240 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 GANABQ14697 944 aaKnown RBP2.82□□□□□ -1.96
SCFD1-221ENST00000556534 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 MOB3BQ86TA1 216 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 CTAGE6Q86UF2 777 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 TPRA1Q86W33 373 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 KIR3DL3Q8N743 410 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 CATSPER1Q8NEC5 780 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 BLOC1S5Q8TDH9 187 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 TPD52L3Q96J77 140 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 RHBGQ9H310 441 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 ETNK2Q9NVF9 386 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 ADAM28Q9UKQ2 775 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 NPIPA1Q9UND3 350 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 RASD1Q9Y272 281 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 TIMM10BQ9Y5J6 103 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 WSB1Q9Y6I7 421 aa2.82□□□□□ -1.96
SCFD1-221ENST00000556534 NOTCH2Q04721 2471 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 FAM47DPA6NHR8 397 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 KRTAP4-16G5E9R7 235 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 GFYI3L273 518 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 TPST2O60704 377 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 H2BFMP0C1H6 154 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 DBTP11182 482 aaKnown RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 POU2F1P14859 743 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 RCC1P18754 421 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 RPS10P46783 165 aaKnown RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 PPOXP50336 477 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 EBI3Q14213 229 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 MESDQ14696 234 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 SLC25A52Q3SY17 297 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 SFT2D3Q587I9 215 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 KLF17Q5JT82 389 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 PDZK1Q5T2W1 519 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 C1orf146Q5VVC0 180 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 RFLNAQ6ZTI6 216 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 CCDC80Q76M96 950 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 DHDDSQ86SQ9 333 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 CDR2LQ86X02 465 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 FAM71E2Q8N5Q1 922 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 ARIH2OSQ8N7S6 290 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 NKAPP1Q8N9T2 125 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 MFSD9Q8NBP5 474 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 OR10A7Q8NGE5 316 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 TBX15Q96SF7 602 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 GAL3ST1Q99999 423 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 PARD6BQ9BYG5 372 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 ROPN1BQ9BZX4 212 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 NXF5Q9H1B4 397 aaKnown RBP2.81□□□□□ -1.96
SCFD1-221ENST00000556534 SGK2Q9HBY8 427 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 MCCC2Q9HCC0 563 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 ZFP14Q9HCL3 533 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 ZNF639Q9UID6 485 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 RAB26Q9ULW5 256 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 PIGLQ9Y2B2 252 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 CACNG2Q9Y698 323 aa2.81□□□□□ -1.96
SCFD1-221ENST00000556534 IGHV3OR16-13A0A075B7E8 117 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 FAM240BA0A1B0GVZ2 78 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 GOLGA8OA6NCC3 632 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 GOLGA8NF8WBI6 632 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 TIMM8AO60220 97 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-221ENST00000556534 TSPAN12O95859 305 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 NCF2P19878 526 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-221ENST00000556534 PRDX3P30048 256 aaKnown RBP2.8□□□□□ -1.96
SCFD1-221ENST00000556534 CCR1P32246 355 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 ATP5OP48047 213 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 HSPA2P54652 639 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 BIDP55957 195 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 ARFRP1Q13795 201 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 TFDP3Q5H9I0 405 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 PAGE3Q5JUK9 113 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 GPRC6AQ5T6X5 926 aa2.8□□□□□ -1.96
SCFD1-221ENST00000556534 CCDC137Q6PK04 289 aaKnown RBP2.8□□□□□ -1.96
SCFD1-221ENST00000556534 UQCC3Q6UW78 93 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms