RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 OR2A14Q96R47 310 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CSF3RQ99062 836 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MYOCQ99972 504 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SULT4A1Q9BR01 284 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 LXNQ9BS40 222 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 DPCDQ9BVM2 203 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 SIK2Q9H0K1 926 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 PCIF1Q9H4Z3 704 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 ZDHHC6Q9H6R6 413 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MANSC1Q9H8J5 431 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MTHFD2LQ9H903 347 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 AKIRIN1Q9H9L7 192 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 C3orf14Q9HBI5 128 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 DNAJC4Q9NNZ3 241 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 C14orf119Q9NWQ9 140 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OXSMQ9NWU1 459 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 TAS2R13Q9NYV9 303 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 IL17BQ9UHF5 180 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 UBQLN1Q9UMX0 589 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 SAMD4AQ9UPU9 718 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 NIP7Q9Y221 180 aaKnown RBP eCLIP5.71□□□□□ -1.5
TDP1-215ENST00000556498 CARHSP1Q9Y2V2 147 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 B3GALT1Q9Y5Z6 326 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 ARHGAP23Q9P227 1491 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 A0A1B0GUL6 1792 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 KIF1BO60333 1816 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ZCWPW2A0A1B0GU75 182 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HYKKA2RU49 373 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 C2orf78A6NCI8 922 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ANKRD61A6NGH8 418 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FAM90A27PA6NNH2 459 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SCDO00767 359 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 DVL1O14640 695 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 LAMTOR5O43504 91 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 PLRG1O43660 514 aaKnown RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 GLSO94925 669 aaPredicted RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 MOCS3O95396 460 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FGF19O95750 216 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 MT-CO2P00403 227 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 CST4P01036 141 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 EGFP01133 1207 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ALPIP09923 528 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 UCHL1P09936 223 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HIST1H2AGP0C0S8 130 aaPredicted RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 KITP10721 976 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 TNFRSF1AP19438 455 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 CD22P20273 847 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HIST1H2ADP20671 130 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 MGAT1P26572 445 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HTR1BP28222 390 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 S100GP29377 79 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 VIPR1P32241 457 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 GJA4P35212 333 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 GGT5P36269 586 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 LIPAP38571 399 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 AQP2P41181 271 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FRKP42685 505 aaPredicted RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 LSSP48449 732 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ERVFC1-1P60608 527 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 NCS1P62166 190 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 MS4A2Q01362 244 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 KIAA0141Q14154 515 aaPredicted RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 TAZQ16635 292 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 QRICH1Q2TAL8 776 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 PRTGQ2VWP7 1150 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SLC22A6Q4U2R8 563 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 RAB41Q5JT25 222 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 C10orf91Q5T1B1 145 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 CPZQ66K79 652 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HIST2H2AA3Q6FI13 130 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ADNP2Q6IQ32 1131 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 STEAP1BQ6NZ63 245 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ZNF790Q6PG37 636 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 WDR59Q6PJI9 974 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 TMEM220Q6QAJ8 160 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 SMARCD3Q6STE5 483 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FAM198BQ6UWH4 519 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 TECPR1Q7Z6L1 1165 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 ABI3BPQ7Z7G0 1075 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 P2RY8Q86VZ1 359 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 KCNMB4Q86W47 210 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FUNDC1Q8IVP5 155 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 LRRC56Q8IYG6 542 aaPredicted RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 KIAA0895Q8NCT3 520 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 DUSP18Q8NEJ0 188 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 MDGA1Q8NFP4 955 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 OR56A1Q8NGH5 318 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 OR13C8Q8NGS7 320 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 OR10K1Q8NGX5 313 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 TBCKQ8TEA7 893 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 DNAJB3Q8WWF6 145 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 TFGQ92734 400 aaPredicted RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 ROPN1LQ96C74 230 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 RPUSD4Q96CM3 377 aaKnown RBP5.7□□□□□ -1.5
TDP1-215ENST00000556498 ASB9Q96DX5 294 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HIST1H2AHQ96KK5 128 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 FAM84AQ96KN4 292 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 CPXM1Q96SM3 734 aa5.7□□□□□ -1.5
TDP1-215ENST00000556498 HIST1H2AJQ99878 128 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms