RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 FABP6P51161 128 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 POLR2JP52435 117 aaKnown RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 IRX1P78414 480 aaPredicted RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 ZSWIM7Q19AV6 140 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 RPS26P11Q5JNZ5 115 aaPredicted RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 C6orf10Q5SRN2 563 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 TMEM225Q6GV28 225 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 MSANTD1Q6ZTZ1 278 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 GPAT4Q86UL3 456 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 MUC15Q8N387 334 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 C17orf78Q8N4C9 275 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 C1orf162Q8NEQ5 155 aaPredicted RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 OR9I1Q8NGQ6 314 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 VPS33AQ96AX1 596 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 AURKBQ96GD4 344 aaPredicted RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 TMEM19Q96HH6 336 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 ZNF385AQ96PM9 386 aaKnown RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 RHNO1Q9BSD3 238 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 TAPBPLQ9BX59 468 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 CACYBPQ9HB71 228 aaKnown RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 THUMPD1Q9NXG2 353 aaKnown RBP19.82■□□□□ 0.76
ACTN1-220ENST00000556433 ADAM21Q9UKJ8 722 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 AMDHD2Q9Y303 409 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 ATP23Q9Y6H3 246 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 ABCA1O95477 2261 aa19.82■□□□□ 0.76
ACTN1-220ENST00000556433 A0A0G2JPF8 293 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 AQP7P3A6NL99 342 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 A8MVM7 634 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 HNRNPCL2B2RXH8 293 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 HNRNPCL3B7ZW38 293 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 HNRNPCL1O60812 293 aaKnown RBP19.81■□□□□ 0.76
ACTN1-220ENST00000556433 CRLF1O75462 422 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 HNRNPCL4P0DMR1 293 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 PRG2P13727 222 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 NCF2P19878 526 aaPredicted RBP19.81■□□□□ 0.76
ACTN1-220ENST00000556433 MPGP29372 298 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 RNF220Q5VTB9 566 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 C11orf71Q6IPW1 123 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 B3GLCTQ6Y288 498 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 MIER2Q8N344 545 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 MDFIQ99750 246 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 SPATA9Q9BWV2 254 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 ARMC7Q9H6L4 198 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 ADPRHL2Q9NX46 363 aa19.81■□□□□ 0.76
ACTN1-220ENST00000556433 SONP18583 2426 aaKnown RBP19.81■□□□□ 0.76
ACTN1-220ENST00000556433 CDH2P19022 906 aaPredicted RBP19.8■□□□□ 0.76
ACTN1-220ENST00000556433 NUDT6P53370 316 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 PRPS1P60891 318 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 RAB35Q15286 201 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 POMGNT2Q8NAT1 580 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 TLCD1Q96CP7 247 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 PIF1Q9H611 641 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 FKRPQ9H9S5 495 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 TMBIM4Q9HC24 238 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 CHST2Q9Y4C5 530 aa19.8■□□□□ 0.76
ACTN1-220ENST00000556433 HEATR1Q9H583 2144 aaKnown RBP19.79■□□□□ 0.76
ACTN1-220ENST00000556433 FAM234BA2RU67 622 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 SLC25A3Q00325 362 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 ZNF311Q5JNZ3 666 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 C1orf140Q5VVS0 124 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 ZNF544Q6NX49 715 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 SERPINA11Q86U17 422 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 GTF2H4Q92759 462 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 YAE1D1Q9NRH1 226 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 IFT52Q9Y366 437 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 PCDHB14Q9Y5E9 798 aa19.79■□□□□ 0.76
ACTN1-220ENST00000556433 IGHV4-30-2A0A087WSY4 118 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 CD5LO43866 347 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 KRT33AO76009 404 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 VAMP5O95183 116 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 WNT11O96014 354 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 NUDT7P0C024 238 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 C1QTNF12Q5T7M4 302 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 SLC2A7Q6PXP3 512 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 KLHL24Q6TFL4 600 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 ABHD12BQ7Z5M8 362 aaPredicted RBP19.78■□□□□ 0.76
ACTN1-220ENST00000556433 HTRA1Q92743 480 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 C3orf49Q96BT1 292 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 USH1CQ9Y6N9 552 aa19.78■□□□□ 0.76
ACTN1-220ENST00000556433 DNHD1Q96M86 4753 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 A0A096LPI6 279 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 CLIC1O00299 241 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 KLF11O14901 512 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 FRS3O43559 492 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 TLX2O43763 284 aaPredicted RBP19.77■□□□□ 0.76
ACTN1-220ENST00000556433 P2RY4P51582 365 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 RGNQ15493 299 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 HIKESHIQ53FT3 197 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 CLEC2AQ6UVW9 174 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 EPGNQ6UW88 154 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 CREB3L2Q70SY1 520 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 OR10H5Q8NGA6 315 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 STK35Q8TDR2 534 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 PAIP1Q9H074 479 aaKnown RBP19.77■□□□□ 0.76
ACTN1-220ENST00000556433 RAD21L1Q9H4I0 556 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 BCL2L10Q9HD36 194 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 TMEM45AQ9NWC5 275 aa19.77■□□□□ 0.76
ACTN1-220ENST00000556433 CR1P17927 2039 aa19.76■□□□□ 0.75
ACTN1-220ENST00000556433 ANK3Q12955 4377 aaKnown RBP19.76■□□□□ 0.75
ACTN1-220ENST00000556433 NPIPB7O75200 414 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms