RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 EVA1AQ9H8M9 152 aa13.92□□□□□ -0.18
ARHGEF40-207ENST00000556399 CMC2Q9NRP2 79 aa13.92□□□□□ -0.18
ARHGEF40-207ENST00000556399 SDHAF2Q9NX18 166 aa13.92□□□□□ -0.18
ARHGEF40-207ENST00000556399 MRPS17Q9Y2R5 130 aaKnown RBP13.92□□□□□ -0.18
ARHGEF40-207ENST00000556399 A0A0A6YYC8 382 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 I3L1I5 382 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 HCCSP53701 268 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 HEPHL1Q6MZM0 1159 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 VN1R2Q8NFZ6 395 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 ANGPTL6Q8NI99 470 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 TMEM106AQ96A25 262 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 RADILQ96JH8 1075 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 JSRP1Q96MG2 331 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 FOXN4Q96NZ1 517 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 URM1Q9BTM9 101 aaKnown RBP13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 QPCTLQ9NXS2 382 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 PLEKHB1Q9UF11 243 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 ATP6V1G2-DDX39BF2Z307 99 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 HLA-AP01891 365 aaKnown RBP13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 ADH6P28332 368 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 IL13RA1P78552 427 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 TEX261Q6UWH6 196 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 GPAT4Q86UL3 456 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 OR10K1Q8NGX5 313 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 AIFM2Q9BRQ8 373 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 U3KQ87 197 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 TMEM82A0PJX8 343 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 SDC3O75056 442 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 VAMP2P63027 116 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 INSL4Q14641 139 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 TMEM201Q5SNT2 666 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 ALG14Q96F25 216 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 RGCCQ9H4X1 137 aa13.91□□□□□ -0.18
ARHGEF40-207ENST00000556399 HIDE1A8MVS5 230 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 GABARAPH6UMI1 98 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 UBL4AP11441 157 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 CDK5Q00535 292 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 IRF3Q14653 427 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 LAIR2Q6ISS4 152 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 OVCH1Q7RTY7 1134 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 BPIFB2Q8N4F0 458 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 DNAAF1Q8NEP3 725 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 SLC2A12Q8TD20 617 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF296Q8WUU4 475 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PHYHIPQ92561 330 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 BARHL1Q9BZE3 327 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 ACOXLQ9NUZ1 547 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 NCDNQ9UBB6 729 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 FLVCR2Q9UPI3 526 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 RBBP6Q7Z6E9 1792 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 KDM4EB2RXH2 506 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PAPLNO95428 1278 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 NTSR1P30989 418 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 CLRN1P58418 232 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 AWAT2Q6E213 333 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 C7orf61Q8IZ16 206 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 MRPL43Q8N983 215 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 LMX1AQ8TE12 382 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PRRT1Q99946 306 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 LMF2Q9BU23 707 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 OR52A5Q9H2C5 316 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PRSS38A1L453 326 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 SELENOFO60613 162 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 TPOP07202 933 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 C21orf58P58505 322 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 CYCSP99999 105 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 GPR18Q14330 331 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 YIF1BQ5BJH7 314 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 UPRTQ96BW1 309 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 ELOVL3Q9HB03 270 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 ENTPD2Q9Y5L3 495 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 A0A0D9SG52 128 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 H0YGG7 62 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 H7C1C5 153 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PEX12O00623 359 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 SULT1B1O43704 296 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 LIMS3P0CW19 117 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 LIMS4P0CW20 117 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 SLC2A5P22732 501 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 TSFMP43897 325 aaKnown RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 ARF3P61204 181 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 LCN6P62502 163 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 TMEM52BQ4KMG9 183 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 NKAPLQ5M9Q1 402 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 EID2Q8N6I1 236 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF511Q8NB15 262 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 AVL9Q8NBF6 648 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 NAXEQ8NCW5 288 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 OR1J4Q8NGS1 313 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 PAQR8Q8TEZ7 354 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 SCARB1Q8WTV0 552 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 FBLIM1Q8WUP2 373 aa13.9□□□□□ -0.18
ARHGEF40-207ENST00000556399 MAGEB4O15481 346 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 HOXC8P31273 242 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 TM4SF4P48230 202 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 GXYLT1Q4G148 440 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 SIRT6Q8N6T7 355 aa13.89□□□□□ -0.19
ARHGEF40-207ENST00000556399 ANKRD53Q8N9V6 530 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms